RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 NUP58Q9BVL2 599 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 SNX25Q9H3E2 840 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 NLRC4Q9NPP4 1024 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 DAAM1Q9Y4D1 1078 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 WARSP23381 471 aaKnown RBP25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 YWHAHQ04917 246 aaPredicted RBP25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 UBE3AQ05086 875 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 RAPGEF1Q13905 1077 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 RTP2Q5QGT7 225 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 VARS2Q5ST30 1063 aaKnown RBP25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 SPECC1LQ69YQ0 1117 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 OVOS1Q6IE37 1185 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 OSTM1Q86WC4 334 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 OR6B3Q8NGW1 331 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 POF1BQ8WVV4 589 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 GUCD1Q96NT3 240 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 NAA15Q9BXJ9 866 aaKnown RBP25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 CHST7Q9NS84 486 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 CISHQ9NSE2 258 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 FBXL5Q9UKA1 691 aa25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.23■■□□□ 1.63
TSPAN4-203ENST00000397397 H3BNC9 293 aa25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 GNL1P36915 607 aaPredicted RBP25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 GLUD2P49448 558 aa25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 CACNA2D4Q7Z3S7 1137 aa25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 TMC6Q7Z403 805 aa25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 SPATA18Q8TC71 538 aa25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 RIN2Q8WYP3 895 aaPredicted RBP25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 CEP72Q9P209 647 aa25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 PCDHB4Q9Y5E5 795 aa25.22■■□□□ 1.63
TSPAN4-203ENST00000397397 GRM6O15303 877 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 URODP06132 367 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 LHX1P48742 406 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 DRAP1Q14919 205 aaPredicted RBP25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 THEM5Q8N1Q8 247 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 TTC39CQ8N584 583 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 UBR7Q8N806 425 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 JAKMIP2Q96AA8 810 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 STK33Q9BYT3 514 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 ZBP1Q9H171 429 aa25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 DDX43Q9NXZ2 648 aaKnown RBP25.21■■□□□ 1.63
TSPAN4-203ENST00000397397 H7C4K7 107 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 C2CD2LO14523 706 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 GABRDO14764 452 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 ACO1P21399 889 aaKnown RBP25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 DNAJB1P25685 340 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 DSG1Q02413 1049 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 INCA1Q0VD86 236 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 FIGNQ5HY92 759 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 PRSS55Q6UWB4 352 aaPredicted RBP25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 ANKS3Q6ZW76 656 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 TMC7Q7Z402 723 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 IQCDQ96DY2 449 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 FAM124BQ9H5Z6 455 aaPredicted RBP25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 ZNF576Q9H609 170 aa25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 BARX2Q9UMQ3 279 aaPredicted RBP25.2■■□□□ 1.63
TSPAN4-203ENST00000397397 EPOPA6NHQ4 379 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 A8MXQ7 604 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 HCRTO43612 131 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 OAZ2O95190 189 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 CSPG5O95196 566 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 PDGFRBP09619 1106 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 CTSAP10619 480 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 CA8P35219 290 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 USP8P40818 1118 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 NDST1P52848 882 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 MRPL58Q14197 206 aaKnown RBP25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 KIAA0319Q5VV43 1072 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 ZNF280DQ6N043 979 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 PDXDC1Q6P996 788 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 PPFIBP1Q86W92 1011 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 DRC7Q8IY82 874 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 LNX1Q8TBB1 728 aaPredicted RBP25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 GDPD5Q8WTR4 605 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 CPLX3Q8WVH0 158 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 AUTS2Q8WXX7 1259 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 PIK3R5Q8WYR1 880 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 SPAG5Q96R06 1193 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 TTYH3Q9C0H2 523 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 ENTPD7Q9NQZ7 604 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 TLR9Q9NR96 1032 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 MRPL17Q9NRX2 175 aaKnown RBP25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 NME7Q9Y5B8 376 aa25.2■■□□□ 1.62
TSPAN4-203ENST00000397397 CILPO75339 1184 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 KRT5P13647 590 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 LMO2P25791 158 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 CDC25BP30305 580 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 ERVFC1P60507 584 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 TRIM14Q14142 442 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 BMS1Q14692 1282 aaKnown RBP25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 PSMD5Q16401 504 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 CTXN3Q4LDR2 81 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 TMEM270Q6UE05 265 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 UNC93AQ86WB7 457 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 SHC3Q92529 594 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 TCF25Q9BQ70 676 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 RTP3Q9BQQ7 232 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 EDEM3Q9BZQ6 932 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 HMGXB4Q9UGU5 601 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 SSX2IPQ9Y2D8 614 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms