RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 RPL9P32969 192 aaKnown RBP15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 PNPLA4P41247 253 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 GATMP50440 423 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 POLR2FP61218 127 aaKnown RBP15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 KIF5AQ12840 1032 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 SPA17Q15506 151 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 IQCEQ6IPM2 695 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 SPOPLQ6IQ16 392 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 CACNA2D4Q7Z3S7 1137 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 TATDN2Q93075 761 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 HPDLQ96IR7 371 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 ZNF560Q96MR9 790 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 UROC1Q96N76 676 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 ACBD3Q9H3P7 528 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 RC3H2Q9HBD1 1191 aaKnown RBP15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 AJAP1Q9UKB5 411 aaPredicted RBP15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 NUB1Q9Y5A7 615 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 KIAA1671Q9BY89 1806 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 LRRC53A6NM62 1247 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 PPEF2O14830 753 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 ZNF263O14978 683 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 LCA5LO95447 670 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 HNRNPH2P55795 449 aaKnown RBP15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 MYO1EQ12965 1108 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 GJB7Q6PEY0 223 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 ENOSF1Q7L5Y1 443 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 SECISBP2LQ93073 1101 aaKnown RBP15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 ZNF689Q96CS4 500 aaPredicted RBP15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 DDX27Q96GQ7 796 aaKnown RBP15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 CCDC42Q96M95 316 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 DNAJC12Q9UKB3 198 aa15.85■□□□□ 0.13
TM9SF1-202ENST00000396854 SRGAP2O75044 1071 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 DDHD2O94830 711 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 UPP2O95045 317 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 CLCNKBP51801 687 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 JAM2P57087 298 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 UPP1Q16831 310 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 MAP9Q49MG5 647 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 ZNF667Q5HYK9 610 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 RRAGAQ7L523 313 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 COLGALT2Q8IYK4 626 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 LRRC43Q8N309 656 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 PPM1KQ8N3J5 372 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 FAM71BQ8TC56 605 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 NIF3L1Q9GZT8 377 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 UBE2TQ9NPD8 197 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.84■□□□□ 0.134e-6■■■■■ 72.1
TM9SF1-202ENST00000396854 TSC2P49815 1807 aa15.84■□□□□ 0.13
TM9SF1-202ENST00000396854 CASTOR2A6NHX0 329 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 TBKBP1A7MCY6 615 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 PODXLO00592 558 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 TBXAS1P24557 533 aaPredicted RBP15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 TAF6P49848 677 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 GYS2P54840 703 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 CYP27A1Q02318 531 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 CUL2Q13617 745 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 SMYD5Q6GMV2 418 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 ZNF280BQ86YH2 543 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 TRIM58Q8NG06 486 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 ELMO3Q96BJ8 720 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 KREMEN1Q96MU8 473 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 STK33Q9BYT3 514 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 MED4Q9NPJ6 270 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 NLRC4Q9NPP4 1024 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 ARHGAP20Q9P2F6 1191 aa15.83■□□□□ 0.13
TM9SF1-202ENST00000396854 ZBBXA8MT70 800 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 B4GALT3O60512 393 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 MFAP3P55082 362 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 RNASELQ05823 741 aaKnown RBP15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 WDR72Q3MJ13 1102 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 SV2CQ496J9 727 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 ZNF572Q7Z3I7 529 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 KAT5Q92993 513 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 SLC9A7Q96T83 725 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 PAAF1Q9BRP4 392 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 BCO2Q9BYV7 579 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 GPR88Q9GZN0 384 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 CXXC1Q9P0U4 656 aaPredicted RBP15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 VPS18Q9P253 973 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 DUSP10Q9Y6W6 482 aa15.83■□□□□ 0.12
TM9SF1-202ENST00000396854 PLEKP08567 350 aaPredicted RBP15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 P4HA1P13674 534 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 PAX3P23760 479 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 ASPAP45381 313 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 AARSP49588 968 aaKnown RBP eCLIP15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 LILRA4P59901 499 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 RAPGEF1Q13905 1077 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 RASIP1Q5U651 963 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 CAPZA3Q96KX2 299 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 FAM193BQ96PV7 902 aaPredicted RBP15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 TMEM175Q9BSA9 504 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 MTIF3Q9H2K0 278 aaKnown RBP15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 NRDE2Q9H7Z3 1164 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 GDAP2Q9NXN4 497 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 CACNG4Q9UBN1 327 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 JRKLQ9Y4A0 524 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 PCDHA13Q9Y5I0 950 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 SSU72P8A0A1W2PR75 194 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 MACROD2A1Z1Q3 448 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms