RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ZSCAN16Q9H4T2 348 aaPredicted RBP17.68■□□□□ 0.42
DDR1-229ENST00000396342 TMEM206Q9H813 350 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 LMAN1LQ9HAT1 526 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 SRPRBQ9Y5M8 271 aaKnown RBP17.68■□□□□ 0.42
DDR1-229ENST00000396342 KPNA7A9QM74 516 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 PIRO00625 290 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 MEFVO15553 781 aaPredicted RBP17.67■□□□□ 0.42
DDR1-229ENST00000396342 CD2BP2O95400 341 aaKnown RBP17.67■□□□□ 0.42
DDR1-229ENST00000396342 CYP11A1P05108 521 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 FCARP24071 287 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 AVPR1AP37288 418 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 AMPD3Q01432 767 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 NFE2Q16621 373 aaPredicted RBP17.67■□□□□ 0.42
DDR1-229ENST00000396342 ARID3BQ8IVW6 561 aaPredicted RBP17.67■□□□□ 0.42
DDR1-229ENST00000396342 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 EPSTI1Q96J88 318 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 ZSWIM3Q96MP5 696 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 FAM213AQ9BRX8 229 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 OBP2AQ9NY56 170 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 PCDHB5Q9Y5E4 795 aa17.67■□□□□ 0.42
DDR1-229ENST00000396342 ANKRD63C9JTQ0 380 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 CCNE1P24864 410 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 CXCL12P48061 93 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 RPL10AP62906 217 aaKnown RBP17.66■□□□□ 0.42
DDR1-229ENST00000396342 MYL7Q01449 175 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 BFSP1Q12934 665 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 MYO1EQ12965 1108 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 MTAPQ13126 283 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 PUM1Q14671 1186 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDR1-229ENST00000396342 DGKKQ5KSL6 1271 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 L1TD1Q5T7N2 865 aaKnown RBP17.66■□□□□ 0.42
DDR1-229ENST00000396342 CC2D1AQ6P1N0 951 aaPredicted RBP17.66■□□□□ 0.42
DDR1-229ENST00000396342 DGLUCYQ7Z3D6 616 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 RALGPS2Q86X27 583 aaPredicted RBP17.66■□□□□ 0.42
DDR1-229ENST00000396342 ZCWPW1Q9H0M4 648 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 CHRDQ9H2X0 955 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 TASP1Q9H6P5 420 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 ABI2Q9NYB9 513 aaPredicted RBP17.66■□□□□ 0.42
DDR1-229ENST00000396342 CLIC4Q9Y696 253 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 STYXL1Q9Y6J8 313 aa17.66■□□□□ 0.42
DDR1-229ENST00000396342 RIF1Q5UIP0 2472 aaKnown RBP17.66■□□□□ 0.42
DDR1-229ENST00000396342 ANO9A1A5B4 782 aa17.65■□□□□ 0.42
DDR1-229ENST00000396342 KIAA0391O15091 583 aaKnown RBP17.65■□□□□ 0.42
DDR1-229ENST00000396342 FAM189A1O60320 539 aa17.65■□□□□ 0.42
DDR1-229ENST00000396342 HSP90AA1P07900 732 aaKnown RBP17.65■□□□□ 0.42
DDR1-229ENST00000396342 KRT19P08727 400 aa17.65■□□□□ 0.42
DDR1-229ENST00000396342 TMEM191BP0C7N4 346 aa17.65■□□□□ 0.42
DDR1-229ENST00000396342 DDX6P26196 483 aaKnown RBP eCLIP17.65■□□□□ 0.42
DDR1-229ENST00000396342 STK38Q15208 465 aa17.65■□□□□ 0.42
DDR1-229ENST00000396342 CELF5Q8N6W0 485 aaKnown RBP17.65■□□□□ 0.42
DDR1-229ENST00000396342 MRPS31Q92665 395 aaKnown RBP17.65■□□□□ 0.42
DDR1-229ENST00000396342 ZNF396Q96N95 335 aaPredicted RBP17.65■□□□□ 0.42
DDR1-229ENST00000396342 PANK4Q9NVE7 773 aa17.65■□□□□ 0.42
DDR1-229ENST00000396342 RBAKQ9NYW8 714 aaPredicted RBP17.65■□□□□ 0.42
DDR1-229ENST00000396342 TBC1D7Q9P0N9 293 aa17.65■□□□□ 0.42
DDR1-229ENST00000396342 UXTQ9UBK9 157 aaPredicted RBP17.65■□□□□ 0.42
DDR1-229ENST00000396342 SMG5Q9UPR3 1016 aaKnown RBP17.65■□□□□ 0.42
DDR1-229ENST00000396342 PPEF2O14830 753 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 PRPF40AO75400 957 aaKnown RBP17.64■□□□□ 0.41
DDR1-229ENST00000396342 GARTP22102 1010 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 RBP5P82980 135 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 GRIN1Q05586 938 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 CUL4AQ13619 759 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 SURF1Q15526 300 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 WSCD1Q658N2 575 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 SLC39A4Q6P5W5 647 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 TMEM86AQ8N2M4 240 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 BPIFB1Q8TDL5 484 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 INTS4Q96HW7 963 aaKnown RBP17.64■□□□□ 0.41
DDR1-229ENST00000396342 ANKRD36BP1Q96IX9 119 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 OLFML3Q9NRN5 406 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 ITGA11Q9UKX5 1188 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 AGAP1Q9UPQ3 857 aa17.64■□□□□ 0.41
DDR1-229ENST00000396342 SLC38A8A6NNN8 435 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 PRR5-ARHGAP8B1AHC4 643 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 TNNC2P02585 160 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 CSH1P0DML2 217 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 CSH2P0DML3 217 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
DDR1-229ENST00000396342 SYT1P21579 422 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 PCSK1P29120 753 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 ARHGAP8P85298 464 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 LMNB2Q03252 620 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 FCHO2Q0JRZ9 810 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 MAMSTRQ6ZN01 415 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 TMC8Q8IU68 726 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 MAML2Q8IZL2 1156 aaPredicted RBP17.63■□□□□ 0.41
DDR1-229ENST00000396342 SPEM1Q8N4L4 309 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 CSGALNACT2Q8N6G5 542 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 LRRC52Q8N7C0 313 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 FSIP1Q8NA03 581 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 ZBTB44Q8NCP5 570 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 OR10T2Q8NGX3 314 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 GIPC2Q8TF65 315 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 PRMT8Q9NR22 394 aaPredicted RBP17.63■□□□□ 0.41
DDR1-229ENST00000396342 FBXO2Q9UK22 296 aaPredicted RBP17.63■□□□□ 0.41
DDR1-229ENST00000396342 USP18Q9UMW8 372 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 FAM186AA6NE01 2351 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 DOCK8Q8NF50 2099 aa17.63■□□□□ 0.41
DDR1-229ENST00000396342 EXTL3O43909 919 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms