RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ATP6V1G3Q96LB4 118 aa18.98■□□□□ 0.63
SREBF1-204ENST00000395756 TWNKQ96RR1 684 aa18.98■□□□□ 0.63
SREBF1-204ENST00000395756 PTPN18Q99952 460 aa18.98■□□□□ 0.63
SREBF1-204ENST00000395756 C16orf70Q9BSU1 422 aa18.98■□□□□ 0.63
SREBF1-204ENST00000395756 GRHL1Q9NZI5 618 aa18.98■□□□□ 0.63
SREBF1-204ENST00000395756 SIX4Q9UIU6 781 aa18.98■□□□□ 0.63
SREBF1-204ENST00000395756 FAM187AA6NFU0 413 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 MEFVO15553 781 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-204ENST00000395756 NR1D1P20393 614 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 APOL6Q9BWW8 343 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 H0YGN5 161 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 ADCY6O43306 1168 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 PROZP22891 400 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 MMP8P22894 467 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 POLR2BP30876 1174 aaKnown RBP18.97■□□□□ 0.63
SREBF1-204ENST00000395756 SATB1Q01826 763 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 PTP4A2Q12974 167 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 PPP2R5EQ16537 467 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 SMTNL2Q2TAL5 461 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 KCNT1Q5JUK3 1230 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 EXOC8Q8IYI6 725 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 EMC1Q8N766 993 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 TMEM35BQ8NCS4 154 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 RNF217Q8TC41 542 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 SDCBP2Q9H190 292 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 AGAP1Q9UPQ3 857 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 TNFSF13BQ9Y275 285 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 NFS1Q9Y697 457 aa18.97■□□□□ 0.63
SREBF1-204ENST00000395756 PMS2P54278 862 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 OGDHQ02218 1023 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 ENPEPQ07075 957 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 SLC29A2Q14542 456 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 PNMA8AQ86V59 439 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-204ENST00000395756 HOMEZQ8IX15 550 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 RHOT1Q8IXI2 618 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 OR6J1Q8NGC5 347 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 SEC14L1Q92503 715 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 PRMT7Q9NVM4 692 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-204ENST00000395756 PCYOX1Q9UHG3 505 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 HSPA6P17066 643 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 GTF2A2P52657 109 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 AP3M2P53677 418 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 PLEKHA7Q6IQ23 1121 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 MTHFD1LQ6UB35 978 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 TRIM72Q6ZMU5 477 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 PHF13Q86YI8 300 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-204ENST00000395756 UBA3Q8TBC4 463 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 BCAS4Q8TDM0 211 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 PDZD7Q9H5P4 517 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 TMBIM4Q9HC24 238 aa18.96■□□□□ 0.63
SREBF1-204ENST00000395756 SLC10A6Q3KNW5 377 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 ZNF484Q5JVG2 852 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 GLRA4Q5JXX5 417 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 GSTA5Q7RTV2 222 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 TAB3Q8N5C8 712 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-204ENST00000395756 SHCBP1Q8NEM2 672 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 PPTC7Q8NI37 304 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 NPLOC4Q8TAT6 608 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 ZWILCHQ9H900 591 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 PODXLO00592 558 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 FSCN2O14926 492 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 ADCY8P40145 1251 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 SLC1A1P43005 524 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 ZNF132P52740 706 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 DYNLT1P63172 113 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 SF3A3Q12874 501 aaKnown RBP eCLIP18.95■□□□□ 0.623e-7■■■■□ 20.6
SREBF1-204ENST00000395756 CALCOCO2Q13137 446 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 GRIK4Q16099 956 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 HEXIM2Q96MH2 286 aaKnown RBP18.95■□□□□ 0.62
SREBF1-204ENST00000395756 OSBPL8Q9BZF1 889 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 GBA2Q9HCG7 927 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-204ENST00000395756 CYTH4Q9UIA0 394 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 PASKQ96RG2 1323 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 DICER1Q9UPY3 1922 aaKnown RBP18.95■□□□□ 0.62
SREBF1-204ENST00000395756 BHMG1C9JSJ3 638 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-204ENST00000395756 CLUL1Q15846 466 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 SRLQ86TD4 932 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 MAML3Q96JK9 1138 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 RRAGCQ9HB90 399 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 CDHR5Q9HBB8 845 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 SAE1Q9UBE0 346 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-204ENST00000395756 CNTN6Q9UQ52 1028 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 SCINQ9Y6U3 715 aa18.95■□□□□ 0.62
SREBF1-204ENST00000395756 ASAP2O43150 1006 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 B4GALT4O60513 344 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 PPFIA4O75335 1185 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 RFC1P35251 1148 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-204ENST00000395756 MAGOHP61326 146 aaKnown RBP18.94■□□□□ 0.62
SREBF1-204ENST00000395756 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
SREBF1-204ENST00000395756 ACVR2BQ13705 512 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 SURF1Q15526 300 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.94■□□□□ 0.621e-7■■■■■ 113.8
SREBF1-204ENST00000395756 C10orf88Q9H8K7 445 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 DONSONQ9NYP3 566 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 ACSL3O95573 720 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 CCT5P48643 541 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 SEC24CP53992 1094 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 PLCB3Q01970 1234 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 AMHR2Q16671 573 aa18.94■□□□□ 0.62
SREBF1-204ENST00000395756 VTA1Q9NP79 307 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms