RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 WDR5P61964 334 aaKnown RBP16.13■□□□□ 0.17
SCAF11-204ENST00000395454 CUL2Q13617 745 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 KYAT1Q16773 422 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 CC2D1AQ6P1N0 951 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-204ENST00000395454 NT5DC3Q86UY8 548 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 SPATA4Q8NEY3 305 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 PGBD4Q96DM1 585 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 ARHGEF26Q96DR7 871 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 HES6Q96HZ4 224 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 FAM84AQ96KN4 292 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 THAP2Q9H0W7 228 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 RPF1Q9H9Y2 349 aaKnown RBP16.13■□□□□ 0.17
SCAF11-204ENST00000395454 LRFN2Q9ULH4 789 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 PCDHB7Q9Y5E2 793 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 CDH23Q9H251 3354 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 EOMESO95936 686 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 FTLP02792 175 aaPredicted RBP16.12■□□□□ 0.17
SCAF11-204ENST00000395454 NOP2P46087 812 aaKnown RBP16.12■□□□□ 0.17
SCAF11-204ENST00000395454 BPIFB4P59827 614 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 BIRC3Q13489 604 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 NCOA4Q13772 614 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 RPS6KA1Q15418 735 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 CFAP221Q4G0U5 840 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 C11orf63Q6NUN7 778 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 ZNF598Q86UK7 904 aaKnown RBP16.12■□□□□ 0.17
SCAF11-204ENST00000395454 ARID3AQ99856 593 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 TMEM161AQ9NX61 479 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 KLK14Q9P0G3 267 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 TRIP11Q15643 1979 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 RALGAPA2Q2PPJ7 1873 aa16.12■□□□□ 0.17
SCAF11-204ENST00000395454 BUB1BO60566 1050 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-204ENST00000395454 IL18RAPO95256 599 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 AMHP03971 560 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 USP8P40818 1118 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 ZNF132P52740 706 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 NOP14P78316 857 aaKnown RBP16.11■□□□□ 0.17
SCAF11-204ENST00000395454 FAM189BP81408 668 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 DEFB103AP81534 67 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 TMCO3Q6UWJ1 677 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 AGMOQ6ZNB7 445 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 MRPL10Q7Z7H8 261 aaKnown RBP16.11■□□□□ 0.17
SCAF11-204ENST00000395454 FAXDC2Q96IV6 333 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 PBKQ96KB5 322 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 OSGEPQ9NPF4 335 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 CXXC1Q9P0U4 656 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-204ENST00000395454 GTF3C4Q9UKN8 822 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 MMEP08473 750 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 CXCR5P32302 372 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 MLH1P40692 756 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 GPC5P78333 572 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 DUOXA2Q1HG44 320 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 SLC10A6Q3KNW5 377 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 TMCO2Q7Z6W1 182 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-204ENST00000395454 ZFP42Q96MM3 310 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 ELAC1Q9H777 363 aaKnown RBP16.11■□□□□ 0.17
SCAF11-204ENST00000395454 RSAD1Q9HA92 442 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 ACP6Q9NPH0 428 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 RNF19AQ9NV58 838 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 TMEM59LQ9UK28 342 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 COG5Q9UP83 839 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 NUB1Q9Y5A7 615 aa16.11■□□□□ 0.17
SCAF11-204ENST00000395454 TMCO5BA8MYB1 307 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 CYP1A2P05177 515 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 FGFR1P11362 822 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 UNGP13051 313 aaPredicted RBP16.1■□□□□ 0.17
SCAF11-204ENST00000395454 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 MLLT1Q03111 559 aaPredicted RBP16.1■□□□□ 0.17
SCAF11-204ENST00000395454 CLEC16AQ2KHT3 1053 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 FAM117BQ6P1L5 589 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 ACTRT1Q8TDG2 376 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 GAD1Q99259 594 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 MTIF3Q9H2K0 278 aaKnown RBP16.1■□□□□ 0.17
SCAF11-204ENST00000395454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.1■□□□□ 0.175e-7■■■■■ 40.9
SCAF11-204ENST00000395454 INPP5FQ9Y2H2 1132 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 GIT1Q9Y2X7 761 aa16.1■□□□□ 0.17
SCAF11-204ENST00000395454 ARL5CA6NH57 179 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 ABCB4P21439 1286 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 MCM3P25205 808 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 VSNL1P62760 191 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 GLRA4Q5JXX5 417 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 SPOPLQ6IQ16 392 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 ACAD10Q6JQN1 1059 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 PEX26Q7Z412 305 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 NPAS4Q8IUM7 802 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 EFCAB13Q8IY85 973 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 ABI1Q8IZP0 508 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 RASGEF1CQ8N431 466 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 HERVK_113Q902F9 699 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 SNX27Q96L92 541 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 RPS6KC1Q96S38 1066 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
SCAF11-204ENST00000395454 MTMR12Q9C0I1 747 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 CXCL16Q9H2A7 254 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 ARFGAP3Q9NP61 516 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 UBN1Q9NPG3 1134 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 SEPT11Q9NVA2 429 aaKnown RBP16.09■□□□□ 0.17
SCAF11-204ENST00000395454 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
SCAF11-204ENST00000395454 TTC7AQ9ULT0 858 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms