RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 TMEM117Q9H0C3 514 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 TMEM8AQ9HCN3 771 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 SIX2Q9NPC8 291 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 FAM207AQ9NSI2 230 aaPredicted RBP12.31□□□□□ -0.44
RTN1-203ENST00000395090 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 CDY2AQ9Y6F7 541 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 FRMPD3Q5JV73 1810 aa12.31□□□□□ -0.44
RTN1-203ENST00000395090 M0QZ92 97 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 SGPL1O95470 568 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 CLTAP09496 248 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 FGFR4P22455 802 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 HNRNPH3P31942 346 aaKnown RBP12.3□□□□□ -0.44
RTN1-203ENST00000395090 KRT9P35527 623 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 TNFSF9P41273 254 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 GCLMP48507 274 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 AP3M2P53677 418 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 CCZ1BP86790 482 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 CCZ1P86791 482 aaPredicted RBP12.3□□□□□ -0.44
RTN1-203ENST00000395090 CETN1Q12798 172 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 SURF1Q15526 300 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 EPC2Q52LR7 807 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 SEZ6Q53EL9 994 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 KLHDC7AQ5VTJ3 777 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 KRT39Q6A163 491 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 NOTUMQ6P988 496 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 CDR2LQ86X02 465 aaPredicted RBP12.3□□□□□ -0.44
RTN1-203ENST00000395090 TMEM139Q8IV31 216 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 THNSL1Q8IYQ7 743 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 NEK11Q8NG66 645 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 OR8K1Q8NGG5 319 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 PDE11AQ9HCR9 933 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 AVENQ9NQS1 362 aaPredicted RBP12.3□□□□□ -0.44
RTN1-203ENST00000395090 ABHD10Q9NUJ1 306 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 ZKSCAN5Q9Y2L8 839 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 NOC2LQ9Y3T9 749 aaKnown RBP12.3□□□□□ -0.44
RTN1-203ENST00000395090 SQORQ9Y6N5 450 aa12.3□□□□□ -0.44
RTN1-203ENST00000395090 B4GALT4O60513 344 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 STAG3L1P0CL83 205 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 DLATP10515 647 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 SKILP12757 684 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 GNA15P30679 374 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 THPOP40225 353 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 MYL7Q01449 175 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 GOLGA8FQ08AF8 430 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 GOLGA8DPQ0D2H9 430 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 DCAF4L1Q3SXM0 396 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 ZACNQ401N2 412 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.29□□□□□ -0.44
RTN1-203ENST00000395090 SLC27A1Q6PCB7 646 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 TRIM65Q6PJ69 517 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 APBB1IPQ7Z5R6 666 aaPredicted RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 FAM228AQ86W67 206 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 CEP120Q8N960 986 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 ZNF397Q8NF99 534 aaPredicted RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 EPS8L3Q8TE67 593 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 FNBP1Q96RU3 617 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 ADPGKQ9BRR6 497 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 LSM14BQ9BX40 385 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 NAA15Q9BXJ9 866 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 TRPV6Q9H1D0 765 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 GANQ9H2C0 597 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 CHST12Q9NRB3 414 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 RNF19AQ9NV58 838 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 CEP72Q9P209 647 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 DAAM1Q9Y4D1 1078 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 MEFVO15553 781 aaPredicted RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 SIN3BO75182 1162 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 IL18RAPO95256 599 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 HSPA1AP0DMV8 641 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 HSPA1BP0DMV9 641 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 HARSP12081 509 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 ACTN1P12814 892 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 EDN3P14138 238 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 UCHL3P15374 230 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 IRS1P35568 1242 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 MXI1P50539 228 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 NRLP54845 237 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 PCBP4P57723 403 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 DAB2P98082 770 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 SLC10A6Q3KNW5 377 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 ZSCAN30Q86W11 494 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 WDR49Q8IV35 697 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 TMEM192Q8IY95 271 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 SYN2Q92777 582 aaPredicted RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 FAM161BQ96MY7 647 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 CGRRF1Q99675 332 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 PLEKHA5Q9HAU0 1116 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 TOPORSQ9NS56 1045 aaPredicted RBP12.29□□□□□ -0.44
RTN1-203ENST00000395090 MYO6Q9UM54 1294 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 PLAGL2Q9UPG8 496 aa12.29□□□□□ -0.44
RTN1-203ENST00000395090 CD4P01730 458 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 CKBP12277 381 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 TNNI1P19237 187 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms