RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 LAMTOR4Q0VGL1 99 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 ERMARDQ5T6L9 678 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 CCDC137Q6PK04 289 aaKnown RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 WDR49Q8IV35 697 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 C7orf31Q8N865 590 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 MYCBPAPQ8TBZ2 947 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 NT5C1BQ96P26 610 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 C11orf84Q9BUA3 381 aaPredicted RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 NSRP1Q9H0G5 558 aaKnown RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 PDGFCQ9NRA1 345 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 GJA3Q9Y6H8 435 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 LAMA3Q16787 3333 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 LAMA2P24043 3122 aaKnown RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 CCDC169A6NNP5 214 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 CLDN3O15551 220 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 SLCO1A2P46721 670 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 KCNJ1P48048 391 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 AUHQ13825 339 aaKnown RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 TTLL12Q14166 644 aaPredicted RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 ZKSCAN8Q15776 578 aaPredicted RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 ANKRD42Q8N9B4 389 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 COPS5Q92905 334 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 RNPEPQ9H4A4 650 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 KIAA1586Q9HCI6 787 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 GREB1Q4ZG55 1949 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 SCN10AQ9Y5Y9 1956 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 THSD7BQ9C0I4 1608 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 HNRNPDLO14979 420 aaKnown RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 NPTXRO95502 500 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 SESN3P58005 492 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 C1QBPQ07021 282 aaKnown RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 CEP120Q8N960 986 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 TPX2Q9ULW0 747 aaKnown RBP10.89□□□□□ -0.67
HIF1A-203ENST00000394997 ATP8A1Q9Y2Q0 1164 aa10.89□□□□□ -0.67
HIF1A-203ENST00000394997 DRD4P21917 467 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 IL1R2P27930 398 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 RPL34P49207 117 aaKnown RBP10.88□□□□□ -0.67
HIF1A-203ENST00000394997 ATP13A4Q4VNC1 1196 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 RAB6CQ53S08 254 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 EEF1DP3Q658K8 133 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 YTHDF3Q7Z739 585 aaKnown RBP10.88□□□□□ -0.67
HIF1A-203ENST00000394997 VPS36Q86VN1 386 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 ZNF606Q8WXB4 792 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 PWWP2AQ96N64 755 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 RAB6CQ9H0N0 254 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 WHRNQ9P202 907 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 GTF2IRD1Q9UHL9 959 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 TMEM110-MUSTN1A8MSY1 372 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 GPR25O00155 361 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 CREB1P16220 341 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 SMTNP53814 917 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 IFI35P80217 286 aaPredicted RBP10.88□□□□□ -0.67
HIF1A-203ENST00000394997 MESDQ14696 234 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 RBBP5Q15291 538 aaKnown RBP10.88□□□□□ -0.67
HIF1A-203ENST00000394997 LLGL1Q15334 1064 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 KCNV1Q6PIU1 500 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 CYP4X1Q8N118 509 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 ATG4AQ8WYN0 398 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 ZNF653Q96CK0 615 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 DDX23Q9BUQ8 820 aaKnown RBP10.88□□□□□ -0.67
HIF1A-203ENST00000394997 RBAKQ9NYW8 714 aaPredicted RBP10.88□□□□□ -0.67
HIF1A-203ENST00000394997 GMNCA6NCL1 334 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 SMIM24O75264 130 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 NOP14P78316 857 aaKnown RBP10.88□□□□□ -0.67
HIF1A-203ENST00000394997 ATP11AP98196 1134 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 POU5F1BQ06416 359 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 ALKAL1Q6UXT8 129 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 PIGWQ7Z7B1 504 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 PRUNE1Q86TP1 453 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 SLITRK1Q96PX8 696 aa10.88□□□□□ -0.67
HIF1A-203ENST00000394997 ELAC2Q9BQ52 826 aaKnown RBP10.88□□□□□ -0.67
HIF1A-203ENST00000394997 PSTPIP1O43586 416 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 PGK2P07205 417 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 RARGP13631 454 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 PDE6CP51160 858 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 ADAM17P78536 824 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 CYB5D1Q6P9G0 228 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 BNIPLQ7Z465 357 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 FBF1Q8TES7 1133 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 PICK1Q9NRD5 415 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 SNX24Q9Y343 169 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 NYNRINQ9P2P1 1898 aaKnown RBP10.87□□□□□ -0.67
HIF1A-203ENST00000394997 FOXO6A8MYZ6 492 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 DLATP10515 647 aaKnown RBP10.87□□□□□ -0.67
HIF1A-203ENST00000394997 ABCD1P33897 745 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 RAD23BP54727 409 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 MAGOHP61326 146 aaKnown RBP10.87□□□□□ -0.67
HIF1A-203ENST00000394997 SLC29A2Q14542 456 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 SEPT7Q16181 437 aaKnown RBP10.87□□□□□ -0.67
HIF1A-203ENST00000394997 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
HIF1A-203ENST00000394997 C1orf127Q8N9H9 656 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 TRAPPC12Q8WVT3 735 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 MAGOHBQ96A72 148 aaKnown RBP10.87□□□□□ -0.67
HIF1A-203ENST00000394997 FMO2Q99518 471 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 LBHD1Q9BQE6 289 aaPredicted RBP10.87□□□□□ -0.67
HIF1A-203ENST00000394997 OSBPL7Q9BZF2 842 aa10.87□□□□□ -0.67
HIF1A-203ENST00000394997 FAM129AQ9BZQ8 928 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms