RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ITIH4Q14624 930 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.93□□□□□ -0.18
NFKB1-202ENST00000394820 C6orf89Q6UWU4 347 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 ZDHHC24Q6UX98 284 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 EMC1Q8N766 993 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 C7orf43Q8WVR3 580 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 TBC1D10AQ9BXI6 508 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 ZFATQ9P243 1243 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 STOML1Q9UBI4 398 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 DNAJC8O75937 253 aaPredicted RBP13.93□□□□□ -0.18
NFKB1-202ENST00000394820 ETS2P15036 469 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 PHBP35232 272 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 SOX11P35716 441 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 ECHDC2Q86YB7 292 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 ARID3BQ8IVW6 561 aaPredicted RBP13.93□□□□□ -0.18
NFKB1-202ENST00000394820 FBXO41Q8TF61 875 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 DNPEPQ9ULA0 475 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 DIS3Q9Y2L1 958 aaKnown RBP13.93□□□□□ -0.18
NFKB1-202ENST00000394820 ZMYM2Q9UBW7 1377 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 CENPFP49454 3210 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 WDR64B1ANS9 1081 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 EIF3DO15371 548 aaKnown RBP eCLIP13.92□□□□□ -0.18
NFKB1-202ENST00000394820 STK10O94804 968 aaKnown RBP13.92□□□□□ -0.18
NFKB1-202ENST00000394820 PECAM1P16284 738 aaPredicted RBP13.92□□□□□ -0.18
NFKB1-202ENST00000394820 BMPR2Q13873 1038 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 TFDP1Q14186 410 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 EFTUD2Q15029 972 aaKnown RBP eCLIP13.92□□□□□ -0.183e-6■■■■□ 23.5
NFKB1-202ENST00000394820 HIF1AQ16665 826 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 RSPH3Q86UC2 560 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 RHOT1Q8IXI2 618 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 GSDMBQ8TAX9 411 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 ACAP3Q96P50 834 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 RXFP1Q9HBX9 757 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 AGO4Q9HCK5 861 aaKnown RBP13.92□□□□□ -0.18
NFKB1-202ENST00000394820 PIM2Q9P1W9 311 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 NKX1-2Q9UD57 310 aaPredicted RBP13.92□□□□□ -0.18
NFKB1-202ENST00000394820 FRMPD4Q14CM0 1322 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 MPP2Q14168 576 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 RNF220Q5VTB9 566 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 POU5F2Q8N7G0 328 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 EPS8L1Q8TE68 723 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 HACL1Q9UJ83 578 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 KRT36O76013 467 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 SERPINB3P29508 390 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 GMPSP49915 693 aaPredicted RBP13.92□□□□□ -0.18
NFKB1-202ENST00000394820 KRT81Q14533 505 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 SV2AQ7L0J3 742 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 FAM71DQ8N9W8 422 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 SMC1BQ8NDV3 1235 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 SEL1LQ9UBV2 794 aa13.92□□□□□ -0.18
NFKB1-202ENST00000394820 CNOT7Q9UIV1 285 aaKnown RBP13.92□□□□□ -0.18
NFKB1-202ENST00000394820 COPEO14579 308 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 ADRB2P07550 413 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 NR3C2P08235 984 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 GSCP56915 257 aaPredicted RBP13.91□□□□□ -0.18
NFKB1-202ENST00000394820 PDE1BQ01064 536 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 KPNB1Q14974 876 aaKnown RBP13.91□□□□□ -0.18
NFKB1-202ENST00000394820 ZCCHC23Q6ZST2 131 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 NETO2Q8NC67 525 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 FGD4Q96M96 766 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 RIT2Q99578 217 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 APOL6Q9BWW8 343 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 TSSK1BQ9BXA7 367 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 CNTNAP1P78357 1384 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 MEI4A8MW99 385 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 BGNP21810 368 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 PRKCIP41743 596 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 NUMBP49757 651 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 DALRD3Q5D0E6 543 aaKnown RBP13.91□□□□□ -0.18
NFKB1-202ENST00000394820 RABGAP1LQ5R372 815 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 FAF2Q96CS3 445 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 SERPINB12Q96P63 405 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 SLX4Q8IY92 1834 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 K7ERI5 159 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 CST8O60676 142 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 BRD2P25440 801 aaKnown RBP13.91□□□□□ -0.18
NFKB1-202ENST00000394820 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
NFKB1-202ENST00000394820 SULF1Q8IWU6 871 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 ATXN2LQ8WWM7 1075 aaKnown RBP13.91□□□□□ -0.18
NFKB1-202ENST00000394820 SEMA4DQ92854 862 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 MSTO1Q9BUK6 570 aa13.91□□□□□ -0.18
NFKB1-202ENST00000394820 MRPL42Q9Y6G3 142 aaKnown RBP13.91□□□□□ -0.18
NFKB1-202ENST00000394820 FOXN2P32314 431 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 PSMC5P62195 406 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 TNFAIP1Q13829 316 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 STAT4Q14765 748 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 PGM5Q15124 567 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 MROH9Q5TGP6 573 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 SNX30Q5VWJ9 437 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 ZNF317Q96PQ6 595 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-202ENST00000394820 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 PAPOLBQ9NRJ5 636 aaKnown RBP13.9□□□□□ -0.18
NFKB1-202ENST00000394820 INO80B-WBP1J3KQ70 363 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 MGRN1O60291 552 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 RNF8O76064 485 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 TJP3O95049 919 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 CCNE2O96020 404 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms