RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TAS2R40P59535 323 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 NOMO3P69849 1222 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 SP4Q02446 784 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 MAMLD1Q13495 774 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 TARBP2Q15633 366 aaKnown RBP16.44■□□□□ 0.22
PTBP1-204ENST00000394601 ARHGEF2Q92974 986 aaKnown RBP16.44■□□□□ 0.22
PTBP1-204ENST00000394601 RUNDC3BQ96NL0 473 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 WRNIP1Q96S55 665 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 DCLK3Q9C098 648 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 CNOT10Q9H9A5 744 aaKnown RBP16.44■□□□□ 0.22
PTBP1-204ENST00000394601 PARP2Q9UGN5 583 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 HAO1Q9UJM8 370 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 A0A0B4J269 797 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 PEX10O60683 326 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 STAM2O75886 525 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 ITGBL1O95965 494 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-204ENST00000394601 KRT17Q04695 432 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 TRIP13Q15645 432 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-204ENST00000394601 MTERF2Q49AM1 385 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 DEFB132Q7Z7B7 95 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 HOOK3Q86VS8 718 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 UCMAQ8WVF2 138 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 JDP2Q8WYK2 163 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 L3MBTL3Q96JM7 780 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-204ENST00000394601 NUDCD1Q96RS6 583 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 SYT15Q9BQS2 421 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 NIFKQ9BYG3 293 aaKnown RBP16.44■□□□□ 0.22
PTBP1-204ENST00000394601 TCRBV5S1A1TA0A578 114 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 ENTPD5O75356 428 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 PTK6Q13882 451 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 ZC3H18Q86VM9 953 aaKnown RBP16.43■□□□□ 0.22
PTBP1-204ENST00000394601 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 KLRG1Q96E93 195 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 CDC42EP4Q9H3Q1 356 aaKnown RBP16.43■□□□□ 0.22
PTBP1-204ENST00000394601 CCDC134Q9H6E4 229 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 TCEAL9Q9UHQ7 104 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 AGO2Q9UKV8 859 aaKnown RBP16.43■□□□□ 0.22
PTBP1-204ENST00000394601 MTUS1Q9ULD2 1270 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 AFG3L2Q9Y4W6 797 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 NUB1Q9Y5A7 615 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 POLR2AP24928 1970 aaKnown RBP16.43■□□□□ 0.22
PTBP1-204ENST00000394601 ECEL1O95672 775 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 ZCCHC18P0CG32 403 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 ETS2P15036 469 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 CCND1P24385 295 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 SLC1A1P43005 524 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 CUL2Q13617 745 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 LACTB2Q53H82 288 aaPredicted RBP16.43■□□□□ 0.22
PTBP1-204ENST00000394601 PLEKHA7Q6IQ23 1121 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 ACAD9Q9H845 621 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 PASKQ96RG2 1323 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 OTOFQ9HC10 1997 aa16.43■□□□□ 0.22
PTBP1-204ENST00000394601 SUN1O94901 812 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 PROSCO94903 275 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 COPS2P61201 443 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 CNTN2Q02246 1040 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 DALRD3Q5D0E6 543 aaKnown RBP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 RASIP1Q5U651 963 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 ABRAQ8N0Z2 381 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 TTC8Q8TAM2 541 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 RMDN2Q96LZ7 410 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 EPAS1Q99814 870 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 C1orf112Q9NSG2 853 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 OATP04181 439 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 ZNF252P-AS1Q0IIN9 211 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 SLMAPQ14BN4 828 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 SGO2Q562F6 1265 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 USP37Q86T82 979 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 PHF13Q86YI8 300 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 FITM2Q8N6M3 262 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 SLC16A10Q8TF71 515 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 DKC1O60832 514 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 AGTP01019 485 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 UBTFL6P0CB48 400 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 NAMPTP43490 491 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 LIG4P49917 911 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 BLMHQ13867 455 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 HP1BP3Q5SSJ5 553 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 C6orf118Q5T5N4 469 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 APBB1IPQ7Z5R6 666 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 EXOC3L1Q86VI1 746 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 EZH1Q92800 747 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 CDHR1Q96JP9 859 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 FAM81BQ96LP2 452 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 MAF1Q9H063 256 aa16.42■□□□□ 0.22
PTBP1-204ENST00000394601 CORO1CQ9ULV4 474 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 CTDP1Q9Y5B0 961 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-204ENST00000394601 GSTTP1A0A1W2PQM5 241 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 TCF4P15884 667 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 SSTR3P32745 418 aaPredicted RBP16.41■□□□□ 0.22
PTBP1-204ENST00000394601 ARMC9Q7Z3E5 817 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 PIGWQ7Z7B1 504 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 BICD1Q96G01 975 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 TARS2Q9BW92 718 aaKnown RBP16.41■□□□□ 0.22
PTBP1-204ENST00000394601 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 USP15Q9Y4E8 981 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms