RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 METTL23Q86XA0 190 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 GUF1Q8N442 669 aaKnown RBP8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 LRRC52Q8N7C0 313 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 ATAD1Q8NBU5 361 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 STKLD1Q8NE28 680 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 ITFG1Q8TB96 612 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 PARD3BQ8TEW8 1205 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 RSAD2Q8WXG1 361 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 ING5Q8WYH8 240 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 SPOCK2Q92563 424 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 CCDC34Q96HJ3 373 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 HPDLQ96IR7 371 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 TIGD1Q96MW7 591 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 CORO1BQ9BR76 489 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 MMRN2Q9H8L6 949 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 C11orf16Q9NQ32 467 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 TMLHEQ9NVH6 421 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 RMND1Q9NWS8 449 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 CGNQ9P2M7 1197 aaKnown RBP8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 DNMT3BQ9UBC3 853 aaKnown RBP8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 AFF4Q9UHB7 1163 aaKnown RBP8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 TRAF3IP3Q9Y228 551 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 NR2E1Q9Y466 385 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 YIPF1Q9Y548 306 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 INSL5Q9Y5Q6 135 aa8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.25□□□□□ -1.09
HMGB3P1-201ENST00000393368 OR6C75A6NL08 312 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 PI4K2BG5E9Z4 385 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 HUS1O60921 280 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 KIF20AO95235 890 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 VNN1O95497 513 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 C1RP00736 705 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 LRG1P02750 347 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 HNRNPA1P09651 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 GJA1P17302 382 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 BMP6P22004 513 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 FSHRP23945 695 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 PNPLA4P41247 253 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 RAP1GAPP47736 663 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 PSMC1P62191 440 aaKnown RBP8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 UBE2HP62256 183 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 GPR17Q13304 367 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 SOWAHAQ2M3V2 549 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 TPGS2Q68CL5 300 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 SCARA5Q6ZMJ2 495 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 SLC9A9Q8IVB4 645 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 TCEAL8Q8IYN2 117 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 ADGRF2Q8IZF7 708 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 SPATA20Q8TB22 786 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 KBTBD7Q8WVZ9 684 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 TCEAL4Q96EI5 215 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 GSDMAQ96QA5 445 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 SEPT5Q99719 369 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 LPIN3Q9BQK8 851 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 MRPL45Q9BRJ2 306 aaKnown RBP8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 RHOBTB2Q9BYZ6 727 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 ZCWPW1Q9H0M4 648 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 DDX43Q9NXZ2 648 aaKnown RBP8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 ABI2Q9NYB9 513 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 CEP72Q9P209 647 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 NME7Q9Y5B8 376 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 TRIOO75962 3097 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 C2orf16Q68DN1 1984 aa8.24□□□□□ -1.09
HMGB3P1-201ENST00000393368 DENND4AQ7Z401 1863 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 ARHGEF37A1IGU5 675 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 NARSO43776 548 aaKnown RBP8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 PHACTR2O75167 634 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 ATP2C2O75185 946 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 XYLBO75191 536 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 LRRN2O75325 713 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 PAPLNO95428 1278 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 C4BPAP04003 597 aaKnown RBP8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 RHOP08100 348 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 CEBPBP17676 345 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 LMO2P25791 158 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 HOXA9P31269 272 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 CCR2P41597 374 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 GCLMP48507 274 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 GPR15P49685 360 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 VAMP7P51809 220 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 PPP3CAQ08209 521 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 MYO1EQ12965 1108 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 ADAM9Q13443 819 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 TRPC3Q13507 836 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 NCOA4Q13772 614 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 MYBPC2Q14324 1141 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 GSE1Q14687 1217 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 PTPN21Q16825 1174 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 UVSSAQ2YD98 709 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 MGAT5BQ3V5L5 792 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 PABPC1LQ4VXU2 614 aaKnown RBP8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 SDHAF4Q5VUM1 108 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 ANKRD40Q6AI12 368 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 CENPPQ6IPU0 288 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 SPOPLQ6IQ16 392 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 KLHL10Q6JEL2 608 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms