RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 TTBK2Q6IQ55 1244 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 NEK5Q6P3R8 708 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 TUBA3EQ6PEY2 450 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 NLRP9Q7RTR0 991 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 EMID1Q96A84 441 aaPredicted RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 MIEF2Q96C03 454 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 SEPT5Q99719 369 aaPredicted RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 TMEM9BQ9NQ34 198 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 PDRG1Q9NUG6 133 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 FAM86C1Q9NVL1 165 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 SUN2Q9UH99 717 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 BARX2Q9UMQ3 279 aaPredicted RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 UBQLN1Q9UMX0 589 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 EDARQ9UNE0 448 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 PCDHB13Q9Y5F0 798 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 MYH14Q7Z406 1995 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 CLUHO75153 1309 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 M0QYT0 321 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 CSH1P0DML2 217 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 CSH2P0DML3 217 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 BMP1P13497 986 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 RBMS1P29558 406 aaKnown RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 AP2B1P63010 937 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 FOXC1Q12948 553 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 ALCAMQ13740 583 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 COL19A1Q14993 1142 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 ZNF423Q2M1K9 1284 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 ARMC3Q5W041 872 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 ZNF449Q6P9G9 518 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 B4GALNT4Q76KP1 1039 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 DDX53Q86TM3 631 aaKnown RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 CLEC10AQ8IUN9 316 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 CCDC170Q8IYT3 715 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 FAM3CQ92520 227 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 OSBPL6Q9BZF3 934 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 KLF15Q9UIH9 416 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 SMG5Q9UPR3 1016 aaKnown RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 TMX2-CTNND1H3BSU7 103 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 STX10O60499 249 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 UCNP55089 124 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 PLCB3Q01970 1234 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 ADAM15Q13444 863 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 CNGA3Q16281 694 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 TCERG1LQ5VWI1 586 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 ENOX1Q8TC92 643 aaKnown RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 LOXL4Q96JB6 756 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 TSNARE1Q96NA8 513 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 NECAB3Q96P71 396 aaPredicted RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 MIS12Q9H081 205 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 CD248Q9HCU0 757 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 ZDHHC4Q9NPG8 344 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 YBX2Q9Y2T7 364 aaKnown RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 INPP4BO15327 924 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 AP5Z1O43299 807 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 URI1O94763 535 aaPredicted RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 OAS2P29728 719 aaKnown RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 GYS2P54840 703 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 CENPCQ03188 943 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 GABPAQ06546 454 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 C19orf57Q0VDD7 668 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 IQCB1Q15051 598 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 LMBR1Q8WVP7 490 aa8.6□□□□□ -1.03
LIMS1-203ENST00000393310 MAGED1Q9Y5V3 778 aaPredicted RBP8.6□□□□□ -1.03
LIMS1-203ENST00000393310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.59□□□□□ -1.03
LIMS1-203ENST00000393310 POM121CA8CG34 1229 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 BIN1O00499 593 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 APBB3O95704 486 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 CTSAP10619 480 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 RPIAP49247 311 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 PRKCEQ02156 737 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 SV2CQ496J9 727 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 MUM1L1Q5H9M0 696 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 WDR44Q5JSH3 913 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 GALNT15Q8N3T1 639 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 TEX19Q8NA77 164 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 PIGKQ92643 395 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 CCT7Q99832 543 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 CCDC68Q9H2F9 335 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 ZNF148Q9UQR1 794 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 WDR37Q9Y2I8 494 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 PER2O15055 1255 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 MUSKO15146 869 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 CETN3O15182 167 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 CCNT1O60563 726 aaKnown RBP8.59□□□□□ -1.03
LIMS1-203ENST00000393310 TMCC1O94876 653 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 MBD3O95983 291 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 OXCT1P55809 520 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 ELOAQ14241 798 aaKnown RBP8.59□□□□□ -1.03
LIMS1-203ENST00000393310 FLOT2Q14254 428 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 ITPRIPL2Q3MIP1 535 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 TDRD10Q5VZ19 366 aaKnown RBP8.59□□□□□ -1.03
LIMS1-203ENST00000393310 NXNQ6DKJ4 435 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 THOC7Q6I9Y2 204 aaKnown RBP8.59□□□□□ -1.03
LIMS1-203ENST00000393310 MTHFD1LQ6UB35 978 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 DTHD1Q6ZMT9 781 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 BLIDQ8IZY5 108 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 ARHGAP18Q8N392 663 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 FBXO18Q8NFZ0 1043 aa8.59□□□□□ -1.03
LIMS1-203ENST00000393310 HAUS1Q96CS2 278 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms