RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 MTFR1Q15390 333 aa18.62■□□□□ 0.57
MBD4-202ENST00000393278 RPS6KA1Q15418 735 aa18.62■□□□□ 0.57
MBD4-202ENST00000393278 C11orf63Q6NUN7 778 aa18.62■□□□□ 0.57
MBD4-202ENST00000393278 RSRC2Q7L4I2 434 aaKnown RBP18.62■□□□□ 0.57
MBD4-202ENST00000393278 CTAGE6Q86UF2 777 aa18.62■□□□□ 0.57
MBD4-202ENST00000393278 CTAGE4Q8IX94 777 aa18.62■□□□□ 0.57
MBD4-202ENST00000393278 ZNF564Q8TBZ8 553 aaPredicted RBP18.62■□□□□ 0.57
MBD4-202ENST00000393278 PSMB7Q99436 277 aa18.62■□□□□ 0.57
MBD4-202ENST00000393278 ZNF518BQ9C0D4 1074 aa18.62■□□□□ 0.57
MBD4-202ENST00000393278 CHORDC1Q9UHD1 332 aaPredicted RBP18.62■□□□□ 0.57
MBD4-202ENST00000393278 BRCA2P51587 3418 aa18.62■□□□□ 0.57
MBD4-202ENST00000393278 CXCR5P32302 372 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 MLH1P40692 756 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 NDST1P52848 882 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
MBD4-202ENST00000393278 PTP4A2Q12974 167 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 AGMOQ6ZNB7 445 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 TMEM35BQ8NCS4 154 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 GSTCDQ8NEC7 633 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 UBXN4Q92575 508 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 GOLGA1Q92805 767 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 GOLGA2P5Q9HBQ8 144 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 SLC38A7Q9NVC3 462 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 ADAM22Q9P0K1 906 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 AMFRQ9UKV5 643 aa18.61■□□□□ 0.57
MBD4-202ENST00000393278 A0A0U1RQF3 1178 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 MMP8P22894 467 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 RRM1P23921 792 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 ORC1Q13415 861 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 LIN9Q5TKA1 542 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 CAGE1Q8TC20 777 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 LPPQ93052 612 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 HES6Q96HZ4 224 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 DEFB118Q96PH6 123 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 RPS6KC1Q96S38 1066 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 GAD1Q99259 594 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 ADAM2Q99965 735 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 C11orf70Q9BRQ4 267 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 LHX5Q9H2C1 402 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 GDAP2Q9NXN4 497 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 OGDHLQ9ULD0 1010 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 CEP83Q9Y592 693 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 KPNA7A9QM74 516 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 PDE2AO00408 941 aaPredicted RBP18.6■□□□□ 0.57
MBD4-202ENST00000393278 CES2O00748 559 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 VDRP11473 427 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 SKIP12755 728 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 CCL5P13501 91 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 HSPA6P17066 643 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 TAF6P49848 677 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 DNA2P51530 1060 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 MBTPS1Q14703 1052 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 ELF2Q15723 593 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 PTPROQ16827 1216 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 MMS22LQ6ZRQ5 1243 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 C1orf131Q8NDD1 294 aaKnown RBP18.6■□□□□ 0.57
MBD4-202ENST00000393278 MRPL45Q9BRJ2 306 aaKnown RBP18.6■□□□□ 0.57
MBD4-202ENST00000393278 NT5C1AQ9BXI3 368 aa18.6■□□□□ 0.57
MBD4-202ENST00000393278 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.6■□□□□ 0.57
MBD4-202ENST00000393278 ARL5CA6NH57 179 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 SPTLC1O15269 473 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 MYCP01106 439 aaPredicted RBP18.59■□□□□ 0.57
MBD4-202ENST00000393278 THP07101 528 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 TUBB4BP68371 445 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 SOWAHAQ2M3V2 549 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 SV2CQ496J9 727 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 C2CD6Q53TS8 623 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 TEX35Q5T0J7 233 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 DENND1BQ6P3S1 775 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 ZNF572Q7Z3I7 529 aaPredicted RBP18.59■□□□□ 0.57
MBD4-202ENST00000393278 FAM126BQ8IXS8 530 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 WDTC1Q8N5D0 677 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 RPGRIP1Q96KN7 1286 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 RNF208Q9H0X6 261 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 RNF14Q9UBS8 474 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 KIAA1257Q9ULG3 409 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 ALG6Q9Y672 507 aa18.59■□□□□ 0.57
MBD4-202ENST00000393278 AFF1P51825 1210 aaKnown RBP18.58■□□□□ 0.57
MBD4-202ENST00000393278 MESDQ14696 234 aa18.58■□□□□ 0.57
MBD4-202ENST00000393278 PLEKHA7Q6IQ23 1121 aa18.58■□□□□ 0.57
MBD4-202ENST00000393278 LIMS2Q7Z4I7 341 aa18.58■□□□□ 0.57
MBD4-202ENST00000393278 UBE2Q2Q8WVN8 375 aa18.58■□□□□ 0.57
MBD4-202ENST00000393278 PGBD4Q96DM1 585 aa18.58■□□□□ 0.57
MBD4-202ENST00000393278 PBKQ96KB5 322 aa18.58■□□□□ 0.57
MBD4-202ENST00000393278 HEXIM2Q96MH2 286 aaKnown RBP18.58■□□□□ 0.57
MBD4-202ENST00000393278 MIOSQ9NXC5 875 aa18.58■□□□□ 0.57
MBD4-202ENST00000393278 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.58■□□□□ 0.57
MBD4-202ENST00000393278 O00370 1275 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 KCNK3O14649 394 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 CALB1P05937 261 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 LILRA4P59901 499 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 CNGA2Q16280 664 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 SGO2Q562F6 1265 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 UNC93AQ86WB7 457 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 ANKRD7Q92527 254 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 RABGGTAQ92696 567 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 TSPYL2Q9H2G4 693 aaPredicted RBP18.57■□□□□ 0.56
MBD4-202ENST00000393278 RSAD1Q9HA92 442 aa18.57■□□□□ 0.56
MBD4-202ENST00000393278 SCINQ9Y6U3 715 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms