RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 DCAF4L1Q3SXM0 396 aa15.92■□□□□ 0.14
MKS1-202ENST00000393119 ZDHHC14Q8IZN3 488 aa15.92■□□□□ 0.14
MKS1-202ENST00000393119 KLHDC9Q8NEP7 349 aa15.92■□□□□ 0.14
MKS1-202ENST00000393119 SPC25Q9HBM1 224 aa15.92■□□□□ 0.14
MKS1-202ENST00000393119 FGGP02679 453 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 CYP3A5P20815 502 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 NDST1P52848 882 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 ZBTB6Q15916 424 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 SYCE1Q8N0S2 351 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 ZNF784Q8NCA9 323 aaPredicted RBP15.91■□□□□ 0.14
MKS1-202ENST00000393119 RAET1EQ8TD07 263 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 EXOC4Q96A65 974 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 DDX47Q9H0S4 455 aaKnown RBP15.91■□□□□ 0.14
MKS1-202ENST00000393119 ERVK-5Q9HDB9 667 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 MAP2K7O14733 419 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 CILPO75339 1184 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 GLI1P08151 1106 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 GHRP10912 638 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 GNAT1P11488 350 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 RBP5P82980 135 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 MAMLD1Q13495 774 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 PTGISQ16647 500 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 ZNF677Q86XU0 584 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 FAM81BQ96LP2 452 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 PCDH10Q9P2E7 1040 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 C2CD2Q9Y426 696 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 ATP8B3O60423 1300 aa15.91■□□□□ 0.14
MKS1-202ENST00000393119 MGEA5O60502 916 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 PYGMP11217 842 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 PEX5P50542 639 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 YARSP54577 528 aaKnown RBP15.9■□□□□ 0.14
MKS1-202ENST00000393119 ZNF572Q7Z3I7 529 aaPredicted RBP15.9■□□□□ 0.14
MKS1-202ENST00000393119 SERINC5Q86VE9 423 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 ZNF296Q8WUU4 475 aaPredicted RBP15.9■□□□□ 0.14
MKS1-202ENST00000393119 HEXIM2Q96MH2 286 aaKnown RBP15.9■□□□□ 0.14
MKS1-202ENST00000393119 DPEP3Q9H4B8 488 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 MIOSQ9NXC5 875 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 RAB21Q9UL25 225 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 USTQ9Y2C2 406 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 SCN1AP35498 2009 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 SPOPO43791 374 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 RPS6KA5O75582 802 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 CD52P31358 61 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 OGDHQ02218 1023 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 MMGT1Q8N4V1 131 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 RNF169Q8NCN4 708 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 CD101Q93033 1021 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 RNPC3Q96LT9 517 aaKnown RBP15.9■□□□□ 0.14
MKS1-202ENST00000393119 KLHL11Q9NVR0 708 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 ITGA11Q9UKX5 1188 aa15.9■□□□□ 0.14
MKS1-202ENST00000393119 GJC1P36383 396 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 LONRF2Q1L5Z9 754 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 PTPN20Q4JDL3 420 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 ATP13A4Q4VNC1 1196 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 C9orf57Q5W0N0 161 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 SH3TC2Q8TF17 1288 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 HERPUD2Q9BSE4 406 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 SENP6Q9GZR1 1112 aaPredicted RBP15.89■□□□□ 0.13
MKS1-202ENST00000393119 TRPV6Q9H1D0 765 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 FAM49BQ9NUQ9 324 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 CNTN3Q9P232 1028 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 DDX20Q9UHI6 824 aaKnown RBP15.89■□□□□ 0.13
MKS1-202ENST00000393119 LCMT1Q9UIC8 334 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 SCN10AQ9Y5Y9 1956 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 GOLGA8SH3BPF8 625 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 MYO1CO00159 1063 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 PTGESO14684 152 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 RAD51CO43502 376 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 PDGFRBP09619 1106 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 MMP8P22894 467 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 LMO2P25791 158 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 HADHBP55084 474 aaKnown RBP15.89■□□□□ 0.13
MKS1-202ENST00000393119 TAS2R40P59535 323 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 GPS2Q13227 327 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 C11orf63Q6NUN7 778 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 TAF2Q6P1X5 1199 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 ACOT1Q86TX2 421 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 ACSF2Q96CM8 615 aaPredicted RBP15.89■□□□□ 0.13
MKS1-202ENST00000393119 TMEM176AQ96HP8 235 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 CPXM1Q96SM3 734 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 RASSF4Q9H2L5 321 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 TRPV2Q9Y5S1 764 aa15.89■□□□□ 0.13
MKS1-202ENST00000393119 KRIT1O00522 736 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 MTA2O94776 668 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 MICAL2O94851 1124 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 INHAP05111 366 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 FGFR1P11362 822 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 TNNC1P63316 161 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 CDC42EP1Q00587 391 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 PTPN11Q06124 597 aaPredicted RBP15.88■□□□□ 0.13
MKS1-202ENST00000393119 ZNF252P-AS1Q0IIN9 211 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 ITGA7Q13683 1181 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 BEND6Q5SZJ8 279 aaPredicted RBP15.88■□□□□ 0.13
MKS1-202ENST00000393119 MAP3K21Q5TCX8 1036 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 ANKS1BQ7Z6G8 1248 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 PHF13Q86YI8 300 aaPredicted RBP15.88■□□□□ 0.13
MKS1-202ENST00000393119 NME8Q8N427 588 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 GSTCDQ8NEC7 633 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 PBKQ96KB5 322 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms