RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 DPP3Q9NY33 737 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 LMCD1Q9NZU5 365 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 CYP2B6P20813 491 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 DSG3P32926 999 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 NNMTP40261 264 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 RARRES1P49788 294 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 WDR49Q8IV35 697 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 CASKIN2Q8WXE0 1202 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 FUT8Q9BYC5 575 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 FRMPD4Q14CM0 1322 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 FAM86B1E9PN63 330 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 SLITRK3O94933 977 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 LSM8O95777 96 aaKnown RBP13.24□□□□□ -0.29
CLTC-202ENST00000393043 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
CLTC-202ENST00000393043 FAM86B2P0C5J1 330 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 PYGBP11216 843 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 HSD17B3P37058 310 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 RAD51Q06609 339 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 TMTC4Q5T4D3 741 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 METTL7BQ6UX53 244 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 DCP1BQ8IZD4 617 aaKnown RBP13.24□□□□□ -0.29
CLTC-202ENST00000393043 ATPAF2Q8N5M1 289 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 FGD4Q96M96 766 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 NSMCE4AQ9NXX6 385 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 E5RI56 91 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 NSUN2Q08J23 767 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLTC-202ENST00000393043 TMEM62Q0P6H9 643 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 MAPRE2Q15555 327 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 UBA3Q8TBC4 463 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 PARD3BQ8TEW8 1205 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 PACSIN1Q9BY11 444 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 POLIQ9UNA4 740 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 SMIM24O75264 130 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 RHBDL3P58872 404 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 DDR1Q08345 913 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 SLC29A2Q14542 456 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 FASTKD1Q53R41 847 aaKnown RBP13.24□□□□□ -0.29
CLTC-202ENST00000393043 NBPF12Q5TAG4 269 aaPredicted RBP13.24□□□□□ -0.29
CLTC-202ENST00000393043 RAET1EQ8TD07 263 aa13.24□□□□□ -0.29
CLTC-202ENST00000393043 GRAP2O75791 330 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 CTSHP09668 335 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 IRAK1P51617 712 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 MCL1Q07820 350 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 C3orf62Q6ZUJ4 267 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 TAS1R2Q8TE23 839 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 CLMNQ96JQ2 1002 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 TADA2AO75478 443 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 SNRPAP09012 282 aaKnown RBP13.23□□□□□ -0.29
CLTC-202ENST00000393043 SERPINB4P48594 390 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 C11orf63Q6NUN7 778 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 GLB1LQ6UWU2 654 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 TSSK1BQ9BXA7 367 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 MTMR12Q9C0I1 747 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 EML4Q9HC35 981 aaKnown RBP13.23□□□□□ -0.29
CLTC-202ENST00000393043 L1RE1Q9UN81 338 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 L3MBTL1Q9Y468 752 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 PARP9Q8IXQ6 854 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 RANBP17Q9H2T7 1088 aaKnown RBP13.23□□□□□ -0.29
CLTC-202ENST00000393043 CHMP2BQ9UQN3 213 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 TMEM120BA0PK00 339 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 AP2B1P63010 937 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 PTK7Q13308 1070 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 TRADDQ15628 312 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 CYP4A22Q5TCH4 519 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 SV2AQ7L0J3 742 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 SRLQ86TD4 932 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 CCDC124Q96CT7 223 aaKnown RBP13.23□□□□□ -0.29
CLTC-202ENST00000393043 CATSPERBQ9H7T0 1116 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.294e-8■■□□□ 14.4
CLTC-202ENST00000393043 WHRNQ9P202 907 aa13.23□□□□□ -0.29
CLTC-202ENST00000393043 FAM200BP0CF97 657 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 ATICP31939 592 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 IL1RL1Q01638 556 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 SNX17Q15036 470 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 MAPRE1Q15691 268 aaKnown RBP13.22□□□□□ -0.29
CLTC-202ENST00000393043 XAB2Q9HCS7 855 aaKnown RBP13.22□□□□□ -0.29
CLTC-202ENST00000393043 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 H0Y3Z8 333 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 VWA5AO00534 786 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 CES2O00748 559 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 EFTUD2Q15029 972 aaKnown RBP eCLIP13.22□□□□□ -0.292e-9■■□□□ 14.3
CLTC-202ENST00000393043 SMTNL2Q2TAL5 461 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 DCAF6Q58WW2 860 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 ST13P4Q8IZP2 240 aaPredicted RBP13.22□□□□□ -0.29
CLTC-202ENST00000393043 ATP8B4Q8TF62 1192 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 ULK4Q96C45 1275 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 TSPAN17Q96FV3 270 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 AGAP3Q96P47 875 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 SUDS3Q9H7L9 328 aaPredicted RBP13.22□□□□□ -0.29
CLTC-202ENST00000393043 KCND1Q9NSA2 647 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 GOLGA8RI6L899 631 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 FAM107AO95990 144 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 POLBP06746 335 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 SPRP35270 261 aaPredicted RBP13.22□□□□□ -0.29
CLTC-202ENST00000393043 MEA1Q16626 185 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 RMDN1Q96DB5 314 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 PLSCR1O15162 318 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms