RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 VSTM1Q6UX27 236 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 CHST13Q8NET6 341 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 PARD3BQ8TEW8 1205 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 ACSF2Q96CM8 615 aaPredicted RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 TARS2Q9BW92 718 aaKnown RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 TXLNGQ9NUQ3 528 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 UVRAGQ9P2Y5 699 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 PPP2R3BQ9Y5P8 575 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 RBBP6Q7Z6E9 1792 aaKnown RBP11.46□□□□□ -0.57
BRF1-204ENST00000392557 OATP04181 439 aa11.46□□□□□ -0.57
BRF1-204ENST00000392557 KRT10P13645 584 aa11.46□□□□□ -0.57
BRF1-204ENST00000392557 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.57
BRF1-204ENST00000392557 CCDC89Q8N998 374 aa11.46□□□□□ -0.57
BRF1-204ENST00000392557 RDM1Q8NG50 284 aa11.46□□□□□ -0.57
BRF1-204ENST00000392557 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.57
BRF1-204ENST00000392557 CKAP2Q8WWK9 683 aa11.46□□□□□ -0.57
BRF1-204ENST00000392557 CHRNB2P17787 502 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 TCF7P36402 384 aaPredicted RBP11.46□□□□□ -0.58
BRF1-204ENST00000392557 CDR2Q01850 454 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 CDR2LQ86X02 465 aaPredicted RBP11.46□□□□□ -0.58
BRF1-204ENST00000392557 ANKMY2Q8IV38 441 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 ZBED8Q8IZ13 594 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 GPD1LQ8N335 351 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 FBXL13Q8NEE6 735 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 LMO3Q8TAP4 145 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 MAIP1Q8WWC4 291 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 ZBTB10Q96DT7 871 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 KLF6Q99612 283 aaPredicted RBP11.46□□□□□ -0.58
BRF1-204ENST00000392557 TIPINQ9BVW5 301 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 WHRNQ9P202 907 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 BRCA1P38398 1863 aaKnown RBP11.46□□□□□ -0.58
BRF1-204ENST00000392557 SOWAHBA6NEL2 793 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 FAM47DPA6NHR8 397 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 ZSCAN5DPP0CG00 497 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 GZMAP12544 262 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 ATP4AP20648 1035 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 MAGEA4P43358 317 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 STAT5BP51692 787 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 IGBP1P78318 339 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 ANKRD20A2Q5SQ80 823 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 ANKRD20A1Q5TYW2 823 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 ANKRD20A3Q5VUR7 823 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 SPOPLQ6IQ16 392 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 SV2AQ7L0J3 742 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 USP37Q86T82 979 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 FBXO16Q8IX29 292 aaPredicted RBP11.46□□□□□ -0.58
BRF1-204ENST00000392557 MORC4Q8TE76 937 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 NUDCD1Q96RS6 583 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 TXNRD2Q9NNW7 524 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 RAB20Q9NX57 234 aa11.46□□□□□ -0.58
BRF1-204ENST00000392557 MYH9P35579 1960 aaKnown RBP11.45□□□□□ -0.58
BRF1-204ENST00000392557 ATP2A1O14983 1001 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 NLRP11P59045 1033 aaKnown RBP11.45□□□□□ -0.58
BRF1-204ENST00000392557 OSTNP61366 133 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 GPS1Q13098 491 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 KCTD2Q14681 263 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 LIN9Q5TKA1 542 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 BZW1Q7L1Q6 419 aaKnown RBP11.45□□□□□ -0.58
BRF1-204ENST00000392557 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.45□□□□□ -0.58
BRF1-204ENST00000392557 MAGEC3Q8TD91 643 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 COPS5Q92905 334 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 CDCA5Q96FF9 252 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 MYLK2Q9H1R3 596 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 TRABDQ9H4I3 376 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 PHTF1Q9UMS5 762 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 A0A0G2JND7 137 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 SGK1O00141 431 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 O00370 1275 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 MAPK13O15264 365 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 CBX6O95503 412 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 CYP2C8P10632 490 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 OVGP1Q12889 678 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 BNIP1Q12981 228 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 ZNF268Q14587 947 aaPredicted RBP11.45□□□□□ -0.58
BRF1-204ENST00000392557 MUM1Q2TAK8 710 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 Q3C1V9 767 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 ZBTB41Q5SVQ8 909 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 NOL9Q5SY16 702 aaKnown RBP11.45□□□□□ -0.58
BRF1-204ENST00000392557 ACAD10Q6JQN1 1059 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 DCUN1D2Q6PH85 259 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 CRELD2Q6UXH1 353 aaPredicted RBP11.45□□□□□ -0.58
BRF1-204ENST00000392557 LONP2Q86WA8 852 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 TRAPPC12Q8WVT3 735 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 OPTNQ96CV9 577 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 PRDM16Q9HAZ2 1276 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 NPHS2Q9NP85 383 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 ADAM22Q9P0K1 906 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 FBXO40Q9UH90 709 aa11.45□□□□□ -0.58
BRF1-204ENST00000392557 MAN1A1P33908 653 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 CYP24A1Q07973 514 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 MYBPC2Q14324 1141 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 SPARCL1Q14515 664 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 ZNF394Q53GI3 561 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 SYCP2LQ5T4T6 812 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 RFX8Q6ZV50 586 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 ECHDC2Q86YB7 292 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 FAM71AQ8IYT1 594 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 ANKRD13AQ8IZ07 590 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms