RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SEMA4DQ92854 862 aa20.14■□□□□ 0.82
CCDC50-202ENST00000392456 NACA2Q9H009 215 aa20.14■□□□□ 0.82
CCDC50-202ENST00000392456 COL1A2P08123 1366 aa20.14■□□□□ 0.81
CCDC50-202ENST00000392456 CLDN3O15551 220 aa20.14■□□□□ 0.81
CCDC50-202ENST00000392456 FAM189A1O60320 539 aa20.14■□□□□ 0.81
CCDC50-202ENST00000392456 BPIFB4P59827 614 aa20.14■□□□□ 0.81
CCDC50-202ENST00000392456 EEF1DP3Q658K8 133 aa20.14■□□□□ 0.81
CCDC50-202ENST00000392456 NFRKBQ6P4R8 1299 aa20.14■□□□□ 0.81
CCDC50-202ENST00000392456 TCHPQ9BT92 498 aa20.14■□□□□ 0.81
CCDC50-202ENST00000392456 MRPL4Q9BYD3 311 aaKnown RBP20.14■□□□□ 0.81
CCDC50-202ENST00000392456 FAM49AQ9H0Q0 323 aaPredicted RBP20.14■□□□□ 0.81
CCDC50-202ENST00000392456 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.14■□□□□ 0.81
CCDC50-202ENST00000392456 SP100P23497 879 aaPredicted RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 CCND3P30281 292 aaPredicted RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 EIF4A3P38919 411 aaKnown RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 CPT1AP50416 773 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 SLC7A5Q01650 507 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 CBX3Q13185 183 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 EPC2Q52LR7 807 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 MFSD14CQ5VZR4 134 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 ZPBP2Q6X784 338 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 RUFY4Q6ZNE9 571 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 TBC1D1Q86TI0 1168 aaPredicted RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 CDHR5Q9HBB8 845 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 SAR1BQ9Y6B6 198 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 HAS3O00219 553 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 ACKR2O00590 384 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 ASAP2O43150 1006 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 TOM1L1O75674 476 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 FAM200BP0CF97 657 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 PSEN2P49810 448 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 MXI1P50539 228 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 PURAQ00577 322 aaKnown RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 TFDP1Q14186 410 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 KIZQ2M2Z5 673 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 CCDC92Q53HC0 331 aaPredicted RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 PAPD7Q5XG87 772 aaKnown RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 APBB1IPQ7Z5R6 666 aaPredicted RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 CD302Q8IX05 232 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 LMNTD2Q8IXW0 634 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 IQCKQ8N0W5 287 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 ZBTB8BQ8NAP8 495 aaPredicted RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 TRPV5Q9NQA5 729 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 GINS2Q9Y248 185 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 Q9Y3F1 56 aa20.13■□□□□ 0.81
CCDC50-202ENST00000392456 TRIP12Q14669 1992 aaPredicted RBP20.13■□□□□ 0.81
CCDC50-202ENST00000392456 CCT8L1PA6NM43 557 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 DUSP11O75319 330 aaKnown RBP20.12■□□□□ 0.81
CCDC50-202ENST00000392456 ATP2A2P16615 1042 aaKnown RBP20.12■□□□□ 0.81
CCDC50-202ENST00000392456 FGFR4P22455 802 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 CDK17Q00537 523 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 IFI16Q16666 785 aaKnown RBP20.12■□□□□ 0.81
CCDC50-202ENST00000392456 AMHR2Q16671 573 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 RNF220Q5VTB9 566 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 SLFN12LQ6IEE8 588 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 SV2AQ7L0J3 742 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 ARHGEF19Q8IW93 802 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 TAS1R2Q8TE23 839 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 ATP6V1G3Q96LB4 118 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 PTPRHQ9HD43 1115 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 TRIM10Q9UDY6 481 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 TREHO43280 583 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 SRGAP2O75044 1071 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 TMOD1P28289 359 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 JAM2P57087 298 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 GNASQ5JWF2 1037 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 IRF2BP2Q7Z5L9 587 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 TMC2Q8TDI7 906 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 NLRP7Q8WX94 980 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 KAT5Q92993 513 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 GPR88Q9GZN0 384 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 C2orf40Q9H1Z8 148 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 DNAJC12Q9UKB3 198 aa20.12■□□□□ 0.81
CCDC50-202ENST00000392456 RCCD1A6NED2 376 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 HMGB1P1B2RPK0 211 aaPredicted RBP20.11■□□□□ 0.81
CCDC50-202ENST00000392456 GPC3P51654 580 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 ADAM17P78536 824 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 CMPK2Q5EBM0 449 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 LZICQ8WZA0 190 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 JAKMIP2Q96AA8 810 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 CCDC42Q96M95 316 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 RBAKQ9NYW8 714 aaPredicted RBP20.11■□□□□ 0.81
CCDC50-202ENST00000392456 AIPL1Q9NZN9 384 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 LRRC42Q9Y546 428 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 SMAPO00193 183 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 ENC1O14682 589 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 GFPT2O94808 682 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 PROZP22891 400 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 OSTNP61366 133 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 ASTE1Q2TB18 679 aaPredicted RBP20.11■□□□□ 0.81
CCDC50-202ENST00000392456 ATF7IP2Q5U623 682 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 TRIM68Q6AZZ1 485 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 CCDC70Q6NSX1 233 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 OLFML1Q6UWY5 402 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 CXCL17Q6UXB2 119 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 TMEM192Q8IY95 271 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 CPB2Q96IY4 423 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 CAPZA3Q96KX2 299 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 APEX2Q9UBZ4 518 aa20.11■□□□□ 0.81
CCDC50-202ENST00000392456 GUCA1BQ9UMX6 200 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms