RNA–Protein interactions for RNA: ENST00000392407.6

MUC4-205, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,645 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-205ENST00000392407 ZNF212Q9UDV6 495 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 USP1O94782 785 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 LYNP07948 512 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 POLR2MP0CAP2 368 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 TAS2R40P59535 323 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 TMPRSS15P98073 1019 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 ZYXQ15942 572 aaKnown RBP12.3□□□□□ -0.44
MUC4-205ENST00000392407 PLEKHG4Q58EX7 1191 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 MCOLN2Q8IZK6 566 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 RBM41Q96IZ5 413 aaKnown RBP12.3□□□□□ -0.44
MUC4-205ENST00000392407 MBOAT7Q96N66 472 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 TMEM121Q9BTD3 319 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 PCMTD2Q9NV79 361 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 PROSCO94903 275 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 TNNI1P19237 187 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 MUTP22033 750 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 SERPINB6P35237 376 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 EPHB1P54762 984 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 ARL4CP56559 192 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 BASP1P80723 227 aaKnown RBP12.3□□□□□ -0.44
MUC4-205ENST00000392407 NFX1Q12986 1120 aaKnown RBP12.3□□□□□ -0.44
MUC4-205ENST00000392407 RGS9BPQ6ZS82 235 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 DENND1AQ8TEH3 1009 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 RSAD2Q8WXG1 361 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 CCDC124Q96CT7 223 aaKnown RBP12.3□□□□□ -0.44
MUC4-205ENST00000392407 CLPTM1LQ96KA5 538 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 FAM192AQ9GZU8 254 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 MRPL47Q9HD33 250 aaKnown RBP12.3□□□□□ -0.44
MUC4-205ENST00000392407 HOMER2Q9NSB8 354 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 LNPEPQ9UIQ6 1025 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 ITGB4P16144 1822 aa12.3□□□□□ -0.44
MUC4-205ENST00000392407 ALDH18A1P54886 795 aaKnown RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 CDK16Q00536 496 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 GABPAQ06546 454 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 NFIAQ12857 509 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 USP4Q13107 963 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 DOK7Q18PE1 504 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 DTNBP1Q96EV8 351 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 DDX27Q96GQ7 796 aaKnown RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 HIC2Q96JB3 615 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 ASCC2Q9H1I8 757 aaPredicted RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 UNC45AQ9H3U1 944 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 C10orf88Q9H8K7 445 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 DMAP1Q9NPF5 467 aaPredicted RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 GPRC5CQ9NQ84 441 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 SLC24A2Q9UI40 661 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 FAM237BA0A1B0GVD1 139 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 NDUFB10O96000 172 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 ADRB2P07550 413 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 DEUP1Q05D60 604 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 SCUBE1Q8IWY4 988 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 WDR18Q9BV38 432 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 KIFC3Q9BVG8 833 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 ZC3H12CQ9C0D7 883 aaKnown RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 EXOC7Q9UPT5 735 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 IPO5O00410 1097 aaKnown RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 YY1P25490 414 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 NFIL3Q16649 462 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 ZNF568Q3ZCX4 644 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 ISLR2Q6UXK2 745 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 ALYREFQ86V81 257 aaKnown RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 ARID3BQ8IVW6 561 aaPredicted RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 DRAXINQ8NBI3 349 aaPredicted RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 SLC26A7Q8TE54 656 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 FAM136AQ96C01 138 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 NMD3Q96D46 503 aaKnown RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 OXNAD1Q96HP4 312 aaPredicted RBP12.29□□□□□ -0.44
MUC4-205ENST00000392407 TUBGCP5Q96RT8 1024 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 CHMP2BQ9UQN3 213 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 PCDHB4Q9Y5E5 795 aa12.29□□□□□ -0.44
MUC4-205ENST00000392407 ZNF335Q9H4Z2 1342 aaPredicted RBP12.28□□□□□ -0.44
MUC4-205ENST00000392407 IGKV6D-41A0A0C4DH26 115 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 TRAFD1O14545 582 aaPredicted RBP12.28□□□□□ -0.44
MUC4-205ENST00000392407 ECE2O60344 883 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 ARP10275 920 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 IRX4P78413 519 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 KLHL38Q2WGJ6 581 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 CMPK2Q5EBM0 449 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
MUC4-205ENST00000392407 SLC9A9Q8IVB4 645 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 TIPINQ9BVW5 301 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 NMUR2Q9GZQ4 415 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 COPEO14579 308 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 FGFR1P11362 822 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 ANPEPP15144 967 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 TM4SF1P30408 202 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 CNPY1Q3B7I2 92 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 GRAMD1BQ3KR37 738 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 XKR9Q5GH70 373 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 RIPOR1Q6ZS17 1223 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
MUC4-205ENST00000392407 PDIK1LQ8N165 341 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 NME8Q8N427 588 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 PLEKHO2Q8TD55 490 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
MUC4-205ENST00000392407 TEKT1Q969V4 418 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms