RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 GPS1Q13098 491 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 FAM71AQ8IYT1 594 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 UBQLN1Q9UMX0 589 aaKnown RBP13.53□□□□□ -0.24
ERCC2-204ENST00000391945 B3GAT3O94766 335 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 CD4P01730 458 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 GLI1P08151 1106 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 MCF2P10911 925 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 YY1P25490 414 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 PTPN11Q06124 597 aaPredicted RBP13.53□□□□□ -0.24
ERCC2-204ENST00000391945 DCAF4L1Q3SXM0 396 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 DUSP28Q4G0W2 176 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 LLGL2Q6P1M3 1020 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 C12orf56Q8IXR9 622 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 CCDC13Q8IYE1 715 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 MCOLN2Q8IZK6 566 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 TTC39CQ8N584 583 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 KRT35Q92764 455 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 RAB21Q9UL25 225 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 CAPN7Q9Y6W3 813 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 FANCGO15287 622 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 MAP3K6O95382 1288 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 ARF4P18085 180 aaPredicted RBP13.53□□□□□ -0.24
ERCC2-204ENST00000391945 ARL2P36404 184 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 GUCY1A3Q02108 690 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 AADACL2Q6P093 401 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 JAMLQ86YT9 394 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 P3H4Q92791 437 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 MAML3Q96JK9 1138 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 MFSD14AQ96MC6 490 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
ERCC2-204ENST00000391945 NIFKQ9BYG3 293 aaKnown RBP13.53□□□□□ -0.24
ERCC2-204ENST00000391945 TIMM13Q9Y5L4 95 aaPredicted RBP13.53□□□□□ -0.24
ERCC2-204ENST00000391945 COL2A1P02458 1487 aaPredicted RBP13.52□□□□□ -0.24
ERCC2-204ENST00000391945 CST3P01034 146 aaPredicted RBP13.52□□□□□ -0.24
ERCC2-204ENST00000391945 SMIM10L2AP0DMW4 78 aa13.52□□□□□ -0.24
ERCC2-204ENST00000391945 SMIM10L2BP0DMW5 78 aa13.52□□□□□ -0.24
ERCC2-204ENST00000391945 GHRP10912 638 aa13.52□□□□□ -0.24
ERCC2-204ENST00000391945 MTHFD1LQ6UB35 978 aa13.52□□□□□ -0.24
ERCC2-204ENST00000391945 ANKRD23Q86SG2 305 aa13.52□□□□□ -0.24
ERCC2-204ENST00000391945 NT5DC3Q86UY8 548 aa13.52□□□□□ -0.24
ERCC2-204ENST00000391945 SLC13A5Q86YT5 568 aaPredicted RBP13.52□□□□□ -0.24
ERCC2-204ENST00000391945 PRG3Q9Y2Y8 225 aaPredicted RBP13.52□□□□□ -0.24
ERCC2-204ENST00000391945 EIF4BP23588 611 aaKnown RBP13.52□□□□□ -0.25
ERCC2-204ENST00000391945 BCAR1P56945 870 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 DAB2IPQ5VWQ8 1189 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 CALR3Q96L12 384 aaKnown RBP13.52□□□□□ -0.25
ERCC2-204ENST00000391945 IFT122Q9HBG6 1241 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 SAYSD1Q9NPB0 183 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 PCDHGC5Q9Y5F6 944 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 MYO1CO00159 1063 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 RASGRF2O14827 1237 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 PHF2O75151 1096 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 RECQL4O94761 1208 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 TAF6P49848 677 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 NDST1P52848 882 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 SLMAPQ14BN4 828 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 SLC27A1Q6PCB7 646 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 CROCCP2Q86T23 111 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 ST6GALNAC4Q9H4F1 302 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 XPNPEP3Q9NQH7 507 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 KCNH4Q9UQ05 1017 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 ARAP2Q8WZ64 1704 aa13.52□□□□□ -0.25
ERCC2-204ENST00000391945 DOCK2Q92608 1830 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 A0A0A6YYK5 440 aaPredicted RBP13.51□□□□□ -0.25
ERCC2-204ENST00000391945 MYBL2P10244 700 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 FMO1Q01740 532 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 TFDP2Q14188 446 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 RNF180Q86T96 592 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 PPM1EQ8WY54 764 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 TNFSF13BQ9Y275 285 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 PPME1Q9Y570 386 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 FAM187AA6NFU0 413 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 MAPK13O15264 365 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 UPP2O95045 317 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 SMPD1P17405 629 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
ERCC2-204ENST00000391945 AMPD2Q01433 879 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 RWDD4Q6NW29 188 aaKnown RBP13.51□□□□□ -0.25
ERCC2-204ENST00000391945 PPTC7Q8NI37 304 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 RNF139Q8WU17 664 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 TMEM176AQ96HP8 235 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 NTPCRQ9BSD7 190 aaKnown RBP13.51□□□□□ -0.25
ERCC2-204ENST00000391945 SIK2Q9H0K1 926 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 SMYD3Q9H7B4 428 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 WDR35Q9P2L0 1181 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 BRWD3Q6RI45 1802 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 UMODL1Q5DID0 1318 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 ARSEP51690 589 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 CACNB2Q08289 660 aaPredicted RBP13.51□□□□□ -0.25
ERCC2-204ENST00000391945 ITKQ08881 620 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 DHX34Q14147 1143 aaKnown RBP13.51□□□□□ -0.25
ERCC2-204ENST00000391945 PIGHQ14442 188 aaPredicted RBP13.51□□□□□ -0.25
ERCC2-204ENST00000391945 THEM5Q8N1Q8 247 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 SOCS4Q8WXH5 440 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 ARL8AQ96BM9 186 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 TSNARE1Q96NA8 513 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 VIPAS39Q9H9C1 493 aa13.51□□□□□ -0.25
ERCC2-204ENST00000391945 INTS9Q9NV88 658 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms