RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TBC1D5Q92609 795 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 JADE3Q92613 823 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 FAM136AQ96C01 138 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 MTFMTQ96DP5 389 aaKnown RBP1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 KLHL32Q96NJ5 620 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 OSBPL9Q96SU4 736 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 TLR10Q9BXR5 811 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 ACTRT3Q9BYD9 372 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 INO80BQ9C086 356 aaPredicted RBP1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 ARHGEF3Q9NR81 526 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 TRHDEQ9UKU6 1024 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 RAD54BQ9Y620 910 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 KAT6AQ92794 2004 aa1.72□□□□□ -2.13
SNORD28B-201ENST00000390993 COL11A2P13942 1736 aaPredicted RBP1.71□□□□□ -2.13
SNORD28B-201ENST00000390993 ZNF804BA4D1E1 1349 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 DNAJC9-AS1A6NH13 148 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 MANSC4A6NHS7 340 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 LRRC3CA6NJW4 275 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 LINC01548A6NM66 108 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 LINC00473A8K010 186 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 MYO1CO00159 1063 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 MGST3O14880 152 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 SLC16A3O15427 465 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 HTRA2O43464 458 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 RBMXL2O75526 392 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 HNRNPCP07910 306 aaKnown RBP eCLIP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 DLDP09622 509 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 CT47B1P0C2W7 299 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 ATXN1LP0C7T5 689 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 MALP21145 153 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 C5AR1P21730 350 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 GATA3P23771 443 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 IARSP41252 1262 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 MMP13P45452 471 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 RECQLP46063 649 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 KCNJ5P48544 419 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 PDE1AP54750 535 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 ZNF280AP59817 542 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TUBA4AP68366 448 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 IL10RAQ13651 578 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 HABP2Q14520 560 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TBCCQ15814 346 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 PTPN21Q16825 1174 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TBC1D25Q3MII6 688 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 CERKLQ49MI3 558 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 FLYWCH1Q4VC44 716 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 KHDC1Q4VXA5 237 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 AARS2Q5JTZ9 985 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 ICE2Q659A1 982 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 DENND2CQ68D51 928 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 SLC9A4Q6AI14 798 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 ANKRD16Q6P6B7 361 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TSHZ1Q6ZSZ6 1077 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 LHFPL2Q6ZUX7 228 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 WDR53Q7Z5U6 358 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 AMIGO2Q86SJ2 522 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 DCBLD1Q8N8Z6 715 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 NSUN7Q8NE18 718 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TMIEQ8NEW7 156 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 SEMA6DQ8NFY4 1073 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 BRIX1Q8TDN6 353 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 DENND1AQ8TEH3 1009 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 NTN5Q8WTR8 489 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TNPO1Q92973 898 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 RAB24Q969Q5 203 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 RGMAQ96B86 450 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 COA7Q96BR5 231 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 MRGPRX4Q96LA9 322 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TEKT5Q96M29 485 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 VRK1Q99986 396 aaPredicted RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 KRTAP9-8Q9BYQ0 159 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 SARS2Q9NP81 518 aaKnown RBP1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 ZSCAN32Q9NX65 697 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TFCP2L1Q9NZI6 479 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 FLRT1Q9NZU1 646 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 SH3BP4Q9P0V3 963 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 CTTNBP2NLQ9P2B4 639 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 RNF7Q9UBF6 113 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 ZDHHC8Q9ULC8 765 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 ST3GAL5Q9UNP4 418 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 SHOC2Q9UQ13 582 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 SH2B3Q9UQQ2 575 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 TBC1D30Q9Y2I9 924 aa1.71□□□□□ -2.14
SNORD28B-201ENST00000390993 ARHGEF17Q96PE2 2063 aaPredicted RBP1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 CCDC78A2IDD5 438 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 WDR91A4D1P6 747 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 TARM1B6A8C7 271 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 PROB1E7EW31 1015 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 UBE2Q2LH0YL09 131 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 M0QYG6 137 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 F2RL2O00254 374 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 C1QL1O75973 258 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 IL33O95760 270 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 FTLP02792 175 aaPredicted RBP1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 NPSP0C0P6 89 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 SBK3P0C264 359 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 XRCC6P12956 609 aaKnown RBP eCLIP1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 ITGB6P18564 788 aa1.7□□□□□ -2.14
SNORD28B-201ENST00000390993 CDK11BP21127 795 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms