RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 GJB3O75712 270 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 PGM3O95394 542 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 NFICP08651 508 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 HSPA1AP0DMV8 641 aaKnown RBP7.09□□□□□ -1.27
TRAV35-201ENST00000390462 HSPA1BP0DMV9 641 aaKnown RBP7.09□□□□□ -1.27
TRAV35-201ENST00000390462 NID1P14543 1247 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 IL1R1P14778 569 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 ACSL1P33121 698 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 ARL3P36405 182 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 NNMTP40261 264 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 MSH2P43246 934 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 TEKQ02763 1124 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 PPARDQ03181 441 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 TLE1Q04724 770 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 CDK5R2Q13319 367 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 SLC44A4Q53GD3 710 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 STEAP3Q658P3 488 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 KAZNQ674X7 775 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 GPR139Q6DWJ6 353 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 SLC22A25Q6T423 547 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 IL27RAQ6UWB1 636 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 CCDC91Q7Z6B0 441 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 ANKS1BQ7Z6G8 1248 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 OR8H3Q8N146 312 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 GPR156Q8NFN8 814 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 KCNG4Q8TDN1 519 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 IRF7Q92985 503 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 TRAPPC9Q96Q05 1148 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 ZNF518BQ9C0D4 1074 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 C2orf40Q9H1Z8 148 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 MRPL46Q9H2W6 279 aaKnown RBP7.09□□□□□ -1.27
TRAV35-201ENST00000390462 ABHD16BQ9H3Z7 469 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 MTG2Q9H4K7 406 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 MANSC1Q9H8J5 431 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 SEPT11Q9NVA2 429 aaKnown RBP7.09□□□□□ -1.27
TRAV35-201ENST00000390462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.09□□□□□ -1.27
TRAV35-201ENST00000390462 SRRDQ9UH36 339 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 RASAL2Q9UJF2 1139 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 WASF3Q9UPY6 502 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.09□□□□□ -1.27
TRAV35-201ENST00000390462 ZFP37Q9Y6Q3 630 aaPredicted RBP7.09□□□□□ -1.27
TRAV35-201ENST00000390462 ARHGEF40Q8TER5 1519 aa7.09□□□□□ -1.27
TRAV35-201ENST00000390462 FLT1P17948 1338 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 H0Y626 953 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 H3BNC9 293 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 PYCARD-AS1I3L0S3 204 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 DYNC1LI2O43237 492 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 SLC7A4O43246 635 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 MTSS1O43312 755 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 OPHN1O60890 802 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 BEST1O76090 585 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 AHSGP02765 367 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 CNPP09543 421 aaKnown RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 HDCP19113 662 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 HPDP32754 393 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 RGS3P49796 1198 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 SOX8P57073 446 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 NLRP5P59047 1200 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 GALNT2Q10471 571 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 LRMPQ12912 555 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 COL9A3Q14050 684 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 NOLC1Q14978 699 aaKnown RBP eCLIP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 MAPKAPK3Q16644 382 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 EMC4Q5J8M3 183 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 C1orf141Q5JVX7 400 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 ANKRD34AQ69YU3 496 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 TATDN1Q6P1N9 297 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 C22orf34Q6ZV56 151 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 KRT28Q7Z3Y7 464 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 TMEM52Q8NDY8 209 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 BCL7CQ8WUZ0 217 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 HOXB13Q92826 284 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 CUL5Q93034 780 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 ZNF845Q96IR2 970 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 TMX3Q96JJ7 454 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 DUSP23Q9BVJ7 150 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 LPAR3Q9UBY5 353 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 GTF3C4Q9UKN8 822 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 ZNF215Q9UL58 517 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 CLCA2Q9UQC9 943 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 MED16Q9Y2X0 877 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 USP15Q9Y4E8 981 aaPredicted RBP7.08□□□□□ -1.28
TRAV35-201ENST00000390462 TTC37Q6PGP7 1564 aa7.08□□□□□ -1.28
TRAV35-201ENST00000390462 AGAP14A8MT82 685 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 PRR33A8MZF0 331 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 INO80B-WBP1J3KQ70 363 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 ACOT7O00154 380 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 KCNQ3O43525 872 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 NRP2O60462 931 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 USP1O94782 785 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 ENDOD1O94919 500 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 MT-ND3P03897 115 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 SLURP2P0DP57 97 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 AMPD1P23109 780 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 ATP5F1P24539 256 aaPredicted RBP7.07□□□□□ -1.28
TRAV35-201ENST00000390462 PRDX5P30044 214 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 GALK1P51570 392 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 SCAPQ12770 1279 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 ADAM15Q13444 863 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms