RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RNF103-CHMP3A0A140T963 221 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 ENO3P13929 434 aaPredicted RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 NBPF20Q3BBV1 942 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 DRC3Q9H069 523 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 RBAKQ9NYW8 714 aaPredicted RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 WARS2Q9UGM6 360 aaKnown RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 TRIM49D1C9J1S8 452 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 E7ENQ6 273 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 INO80B-WBP1J3KQ70 363 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 PSAPP07602 524 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 APRTP07741 180 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 CASP2P42575 452 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 NFX1Q12986 1120 aaKnown RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 MCPH1Q8NEM0 835 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 INO80BQ9C086 356 aaPredicted RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 EME2A4GXA9 379 aaPredicted RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 ADRA1DP25100 572 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 PSMC1P62191 440 aaKnown RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 PRKG1Q13976 671 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 TTLL12Q14166 644 aaPredicted RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 SWSAP1Q6NVH7 229 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 SNX16P57768 344 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 THNSL1Q8IYQ7 743 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 NDUFAF2Q8N183 169 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 RASGEF1CQ8N431 466 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 ZNF75CPQ92670 426 aaPredicted RBP14.94□□□□□ -0.02
RTF1-201ENST00000389629 EME1Q96AY2 570 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 ANKRD36BP1Q96IX9 119 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 KIAA1586Q9HCI6 787 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 RAB6BQ9NRW1 208 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 TOPORSQ9NS56 1045 aaPredicted RBP14.94□□□□□ -0.02
RTF1-201ENST00000389629 LRRC4BQ9NT99 713 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 AGO2Q9UKV8 859 aaKnown RBP14.94□□□□□ -0.02
RTF1-201ENST00000389629 PCDHA3Q9Y5H8 950 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 TISP43B9A030 160 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 DGKIO75912 1065 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 SRGAP2CP0DJJ0 459 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 RPA3P35244 121 aaPredicted RBP14.94□□□□□ -0.02
RTF1-201ENST00000389629 ARSHQ5FYA8 562 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 FAM13CQ8NE31 585 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 TAS1R2Q8TE23 839 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 DTNAQ9Y4J8 743 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 FCHO1O14526 889 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 PSMG1O95456 288 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 ARP10275 920 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 CHKAP35790 457 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 AQP5P55064 265 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 Q4G0T1 1027 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 NOP9Q86U38 636 aaKnown RBP14.94□□□□□ -0.02
RTF1-201ENST00000389629 TCP10LQ8TDR4 215 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 CCT7Q99832 543 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 UPF3AQ9H1J1 476 aaKnown RBP14.94□□□□□ -0.02
RTF1-201ENST00000389629 ZC3H7BQ9UGR2 993 aaKnown RBP14.94□□□□□ -0.02
RTF1-201ENST00000389629 CASZ1Q86V15 1759 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 MED7O43513 233 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 RAD17O75943 681 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 YY1P25490 414 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 TYK2P29597 1187 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 PSEN1P49768 467 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 ROR1Q01973 937 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 MROH9Q5TGP6 573 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 SLFN12LQ6IEE8 588 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 CCNYL1Q8N7R7 359 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 CLMNQ96JQ2 1002 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 NRBP2Q9NSY0 501 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 DDX56Q9NY93 547 aaKnown RBP14.94□□□□□ -0.02
RTF1-201ENST00000389629 HESX1Q9UBX0 185 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 KDM3BQ7LBC6 1761 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 NALCNQ8IZF0 1738 aa14.94□□□□□ -0.02
RTF1-201ENST00000389629 CLPTM1O96005 669 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 KRT7P08729 469 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 CREB1P16220 341 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 TBXAS1P24557 533 aaPredicted RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 IL1RL1Q01638 556 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 BNIP1Q12981 228 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 LRRC15Q8TF66 581 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 INPP5DQ92835 1189 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 HDAC11Q96DB2 347 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 PAFAH2Q99487 392 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 ADPGKQ9BRR6 497 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 POLR3FQ9H1D9 316 aaPredicted RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 PCYOX1Q9UHG3 505 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 HLA-DRAP01903 254 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 KRT76Q01546 638 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 PRUNE1Q86TP1 453 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 LRRC6Q86X45 466 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 DCLK3Q9C098 648 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 CST8O60676 142 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 PDE5AO76074 875 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 CCND2P30279 289 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 DRG2P55039 364 aaKnown RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 DLG4P78352 724 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 R3HDM1Q15032 1099 aaKnown RBP14.93□□□□□ -0.02
RTF1-201ENST00000389629 FBXO36Q8NEA4 188 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 ZNF384Q8TF68 577 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 FAM149B1Q96BN6 582 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 CAAP1Q9H8G2 361 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 NMRK1Q9NWW6 199 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 SPEF2Q9C093 1822 aa14.93□□□□□ -0.02
RTF1-201ENST00000389629 MARSP56192 900 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms