RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 UBE3CQ15386 1083 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 DCLRE1AQ6PJP8 1040 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 ATF7IPQ6VMQ6 1270 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 SULF2Q8IWU5 870 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 MNS1Q8NEH6 495 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 ZNF764Q96H86 408 aaPredicted RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 SLC6A18Q96N87 628 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 ZNF396Q96N95 335 aaPredicted RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 RUNDC3BQ96NL0 473 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 CCDC94Q9BW85 323 aaPredicted RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 ZMAT3Q9HA38 289 aaKnown RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 PDE7BQ9NP56 450 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 DNAJC28Q9NX36 388 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 COQ3Q9NZJ6 369 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 STK17AQ9UEE5 414 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 KLHL3Q9UH77 587 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 TRIM17Q9Y577 477 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 BACE2Q9Y5Z0 518 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 GOLGA6L3A6NEY3 463 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 NT5C1B-RDH14C9J2C7 533 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 SYT5O00445 386 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 CASQ2O14958 399 aaPredicted RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 MMP20O60882 483 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 USP1O94782 785 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 TNFRSF6BO95407 300 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 ATP5BP06576 529 aaKnown RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 TMOD1P28289 359 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 TLX1P31314 330 aaPredicted RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 CCT4P50991 539 aaKnown RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 TKTL1P51854 596 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 FOXO4P98177 505 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 LRMPQ12912 555 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 ITPK1Q13572 414 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 OASLQ15646 514 aaKnown RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 TMEM177Q53S58 311 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 STYK1Q6J9G0 422 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 THAP5Q7Z6K1 395 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 C2CD5Q86YS7 1000 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 TRIM59Q8IWR1 403 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 DRAXINQ8NBI3 349 aaPredicted RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 CHST14Q8NCH0 376 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 OR13H1Q8NG92 308 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 NEDD1Q8NHV4 660 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 CABS1Q96KC9 395 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 BTBD6Q96KE9 485 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 ZDHHC15Q96MV8 337 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 CABP5Q9NP86 173 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 RBM28Q9NW13 759 aaKnown RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 DNAJB12Q9NXW2 375 aaKnown RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 MIS18AQ9NYP9 233 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 STXBP5LQ9Y2K9 1186 aa6.2□□□□□ -1.42
ERCC4-202ENST00000389138 COL11A2P13942 1736 aaPredicted RBP6.2□□□□□ -1.42
ERCC4-202ENST00000389138 ANKRD31Q8N7Z5 1873 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 AGAP14A8MT82 685 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 K7EPI3 171 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 CACNB4O00305 520 aaPredicted RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 A1BGP04217 495 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 SNRNP70P08621 437 aaKnown RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 C6P13671 934 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 EEF1GP26641 437 aaKnown RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 MSH2P43246 934 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 MTNR1BP49286 362 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 TFCP2Q12800 502 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 IKBKEQ14164 716 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 ACAD10Q6JQN1 1059 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 PIWIL3Q7Z3Z3 882 aaKnown RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 RTN4RL1Q86UN2 441 aaPredicted RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 C8orf58Q8NAV2 365 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 SHC3Q92529 594 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 CCDC74BQ96LY2 380 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 PDCD2LQ9BRP1 358 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 STK33Q9BYT3 514 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 BHLHE41Q9C0J9 482 aaPredicted RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 EPS8L2Q9H6S3 715 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 DECR2Q9NUI1 292 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 INTS10Q9NVR2 710 aaKnown RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 TBCCD1Q9NVR7 557 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 RASAL2Q9UJF2 1139 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 HPCAL4Q9UM19 191 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 SLC6A14Q9UN76 642 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 SCAF8Q9UPN6 1271 aaKnown RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 IL16Q14005 1332 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 KDRP35968 1356 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 TJP1Q07157 1748 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 ARHGAP10A1A4S6 786 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 AP3B1O00203 1094 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 PIK3R2O00459 728 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 TXNL1O43396 289 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 TBCAO75347 108 aaKnown RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 CHRNA5P30532 468 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 CCR9P51686 369 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 RNASE9P60153 205 aaKnown RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 ARF3P61204 181 aaPredicted RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 ARF1P84077 181 aaKnown RBP6.19□□□□□ -1.42
ERCC4-202ENST00000389138 ADIPOQQ15848 244 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 TMEM266Q2M3C6 531 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 FLYWCH1Q4VC44 716 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 IYDQ6PHW0 289 aa6.19□□□□□ -1.42
ERCC4-202ENST00000389138 C1orf229Q6ZS94 237 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms