RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 TMEM176AQ96HP8 235 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 PAWRQ96IZ0 340 aaKnown RBP8.52□□□□□ -1.05
ERCC8-202ENST00000381118 HEXIM2Q96MH2 286 aaKnown RBP8.52□□□□□ -1.05
ERCC8-202ENST00000381118 SLC38A7Q9NVC3 462 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 BARX2Q9UMQ3 279 aaPredicted RBP8.52□□□□□ -1.05
ERCC8-202ENST00000381118 GRID2IPA4D2P6 1211 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 C9IYK1 514 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 PITPNM1O00562 1244 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 SRGAP2O75044 1071 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 CAPN15O75808 1086 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 FGFR1P11362 822 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 CYP3A5P20815 502 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 CYP2C18P33260 490 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 GJA8P48165 433 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 NOMO3P69849 1222 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 SV2CQ496J9 727 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 LLGL2Q6P1M3 1020 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 SLC24A5Q71RS6 500 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 C12orf29Q8N999 325 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 C3orf58Q8NDZ4 430 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 RFFLQ8WZ73 363 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 C11orf70Q9BRQ4 267 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 TRAIPQ9BWF2 469 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 SEZ6LQ9BYH1 1024 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 CYP3A43Q9HB55 503 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 CTTNBP2NLQ9P2B4 639 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 INTUQ9ULD6 942 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 COG5Q9UP83 839 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 HYOU1Q9Y4L1 999 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 NME7Q9Y5B8 376 aa8.52□□□□□ -1.05
ERCC8-202ENST00000381118 MICAL3Q7RTP6 2002 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 PODXLO00592 558 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 CYP1A1P04798 512 aaPredicted RBP8.51□□□□□ -1.05
ERCC8-202ENST00000381118 PDGFRBP09619 1106 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 SKIP12755 728 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 LRPAP1P30533 357 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 PNPLA4P41247 253 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
ERCC8-202ENST00000381118 GPC5P78333 572 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 CENPCQ03188 943 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 INCA1Q0VD86 236 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 PLEKHG4Q58EX7 1191 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 ANKRD33Q7Z3H0 272 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 DAAM2Q86T65 1068 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 ACOT1Q86TX2 421 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 APPL2Q8NEU8 664 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 ARMC5Q96C12 935 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 LPIN3Q9BQK8 851 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 NT5C1AQ9BXI3 368 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 FTHL17Q9BXU8 183 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 WNT8AQ9H1J5 351 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 DPEP3Q9H4B8 488 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 CNOT8Q9UFF9 292 aaKnown RBP8.51□□□□□ -1.05
ERCC8-202ENST00000381118 L1RE1Q9UN81 338 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 TTC3P53804 2025 aa8.51□□□□□ -1.05
ERCC8-202ENST00000381118 TMEM110-MUSTN1A8MSY1 372 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 BTNL10A8MVZ5 291 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 A8MXQ7 604 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 I3L4J1 428 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 HUS1O60921 280 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 PAEPP09466 180 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 LMO2P25791 158 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 CXCR5P32302 372 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 PKN2Q16513 984 aaKnown RBP8.5□□□□□ -1.05
ERCC8-202ENST00000381118 TCTN1Q2MV58 587 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 MMS22LQ6ZRQ5 1243 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
ERCC8-202ENST00000381118 MCOLN2Q8IZK6 566 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 TPCN2Q8NHX9 752 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 KBTBD7Q8WVZ9 684 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 FAXDC2Q96IV6 333 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 CAPZA3Q96KX2 299 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 TSPAN18Q96SJ8 248 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 NUP85Q9BW27 656 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 FAM49BQ9NUQ9 324 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 JRKLQ9Y4A0 524 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 PCDHGC5Q9Y5F6 944 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 TIMM13Q9Y5L4 95 aaPredicted RBP8.5□□□□□ -1.05
ERCC8-202ENST00000381118 MRFAP1Q9Y605 127 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 NCANO14594 1321 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 UQCRHLA0A096LP55 91 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 A0A0A6YYK5 440 aaPredicted RBP8.5□□□□□ -1.05
ERCC8-202ENST00000381118 F8W810 466 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 M0QYV0 167 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 CYB561D2O14569 222 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 ZNF185O15231 689 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 MED7O43513 233 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 BUB1BO60566 1050 aaPredicted RBP8.5□□□□□ -1.05
ERCC8-202ENST00000381118 B3GAT3O94766 335 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 UQCRHP07919 91 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 COL6A1P12109 1028 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 RRM1P23921 792 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 ACAT1P24752 427 aaKnown RBP8.5□□□□□ -1.05
ERCC8-202ENST00000381118 GRIK3Q13003 919 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 IFI16Q16666 785 aaKnown RBP8.5□□□□□ -1.05
ERCC8-202ENST00000381118 UPP1Q16831 310 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 LRRC26Q2I0M4 334 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 SGO2Q562F6 1265 aa8.5□□□□□ -1.05
ERCC8-202ENST00000381118 CLLU1OSQ5K130 101 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms