RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 HOXA9P31269 272 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 ATICP31939 592 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 MARSP56192 900 aaKnown RBP15.9■□□□□ 0.14
VCX3B-201ENST00000381029 ZP2Q05996 745 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 NCOA4Q13772 614 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 UVSSAQ2YD98 709 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 TMC5Q6UXY8 1006 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 RNF19BQ6ZMZ0 732 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 RTL10Q7L3V2 364 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 FILIP1Q7Z7B0 1213 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 LRRTM3Q86VH5 581 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 TCEAL8Q8IYN2 117 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 TMEM86AQ8N2M4 240 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 SLC35C1Q96A29 364 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 ELMO3Q96BJ8 720 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 CD320Q9NPF0 282 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 AFF4Q9UHB7 1163 aaKnown RBP15.9■□□□□ 0.14
VCX3B-201ENST00000381029 RWDD2AQ9UIY3 292 aa15.9■□□□□ 0.14
VCX3B-201ENST00000381029 TCF20Q9UGU0 1960 aaKnown RBP15.89■□□□□ 0.13
VCX3B-201ENST00000381029 BICDL2A1A5D9 508 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 ARHGEF37A1IGU5 675 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 TACC1O75410 805 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 MBD3O95983 291 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 HLA-DRAP01903 254 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 C8AP07357 584 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 WEE2P0C1S8 567 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 FAM163BP0C2L3 166 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 EPB41P11171 864 aaKnown RBP15.89■□□□□ 0.13
VCX3B-201ENST00000381029 GTF2H1P32780 548 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 GCLMP48507 274 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 STX17P56962 302 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 NLRP12P59046 1061 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 MYO1EQ12965 1108 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 CBX2Q14781 532 aaPredicted RBP15.89■□□□□ 0.13
VCX3B-201ENST00000381029 CYP26C1Q6V0L0 522 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 FRMD5Q7Z6J6 570 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 USP37Q86T82 979 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 IRF2BP1Q8IU81 584 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 TAS1R2Q8TE23 839 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 ADAMTS19Q8TE59 1207 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 NECAB3Q96P71 396 aaPredicted RBP15.89■□□□□ 0.13
VCX3B-201ENST00000381029 PRKD2Q9BZL6 878 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 POMKQ9H5K3 350 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 TMEM8AQ9HCN3 771 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 TMEM63CQ9P1W3 806 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 DPP7Q9UHL4 492 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 MAFFQ9ULX9 164 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 COQ4Q9Y3A0 265 aa15.89■□□□□ 0.13
VCX3B-201ENST00000381029 C2orf16Q68DN1 1984 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 CCDC195A0A1B0GUA6 201 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 MTMR11A4FU01 709 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 HNRNPA1P09651 372 aaKnown RBP eCLIP15.88■□□□□ 0.13
VCX3B-201ENST00000381029 KRT13P13646 458 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 WARSP23381 471 aaKnown RBP15.88■□□□□ 0.13
VCX3B-201ENST00000381029 CCDC142Q17RM4 750 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 CBWD6Q4V339 395 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 CBWD3Q5JTY5 395 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 CBWD5Q5RIA9 395 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 TRIM59Q8IWR1 403 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 ADGRF2Q8IZF7 708 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 SLC7A14Q8TBB6 771 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 SEMA4DQ92854 862 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 SYAP1Q96A49 352 aaPredicted RBP15.88■□□□□ 0.13
VCX3B-201ENST00000381029 ACBD6Q9BR61 282 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 MRPL45Q9BRJ2 306 aaKnown RBP15.88■□□□□ 0.13
VCX3B-201ENST00000381029 SDCBP2Q9H190 292 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 APOBEC3GQ9HC16 384 aaKnown RBP15.88■□□□□ 0.13
VCX3B-201ENST00000381029 TMLHEQ9NVH6 421 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 PRKAG3Q9UGI9 489 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 POLIQ9UNA4 740 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 DENND4AQ7Z401 1863 aa15.88■□□□□ 0.13
VCX3B-201ENST00000381029 TULP1O00294 542 aaPredicted RBP15.87■□□□□ 0.13
VCX3B-201ENST00000381029 PMM2O15305 246 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 HUS1O60921 280 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 LMO2P25791 158 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 MTHFRP42898 656 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 ARPP19P56211 112 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 ADCY1Q08828 1119 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 BIRC3Q13489 604 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 TRPC3Q13507 836 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 SGSM1Q2NKQ1 1148 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 WDR72Q3MJ13 1102 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 METTL23Q86XA0 190 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 ADHFE1Q8IWW8 467 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 TTC9BQ8N6N2 239 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 ATAD1Q8NBU5 361 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 TAF4BQ92750 862 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 PHF7Q9BWX1 381 aaPredicted RBP15.87■□□□□ 0.13
VCX3B-201ENST00000381029 SRRTQ9BXP5 876 aaKnown RBP15.87■□□□□ 0.13
VCX3B-201ENST00000381029 DDX43Q9NXZ2 648 aaKnown RBP15.87■□□□□ 0.13
VCX3B-201ENST00000381029 HSFX1Q9UBD0 423 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 ARMCX3Q9UH62 379 aaPredicted RBP15.87■□□□□ 0.13
VCX3B-201ENST00000381029 DOCK6Q96HP0 2047 aa15.87■□□□□ 0.13
VCX3B-201ENST00000381029 NOTCH4Q99466 2003 aa15.86■□□□□ 0.13
VCX3B-201ENST00000381029 LOC730098B7Z3J9 87 aa15.86■□□□□ 0.13
VCX3B-201ENST00000381029 N4BP1O75113 896 aaKnown RBP15.86■□□□□ 0.13
VCX3B-201ENST00000381029 CPB1P15086 417 aa15.86■□□□□ 0.13
VCX3B-201ENST00000381029 ASPAP45381 313 aa15.86■□□□□ 0.13
VCX3B-201ENST00000381029 LHX1P48742 406 aa15.86■□□□□ 0.13
VCX3B-201ENST00000381029 KRT39Q6A163 491 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms