RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 HOXA11P31270 313 aaPredicted RBP20.43■□□□□ 0.86
GMDS-201ENST00000380805 FNTAP49354 379 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 RAD23BP54727 409 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 TAP1Q03518 808 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 C2CD6Q53TS8 623 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 APBB1IPQ7Z5R6 666 aaPredicted RBP20.43■□□□□ 0.86
GMDS-201ENST00000380805 JAMLQ86YT9 394 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 C1orf131Q8NDD1 294 aaKnown RBP20.43■□□□□ 0.86
GMDS-201ENST00000380805 SOCS4Q8WXH5 440 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 GCOM2Q9BZD3 368 aaPredicted RBP20.43■□□□□ 0.86
GMDS-201ENST00000380805 SDCBP2Q9H190 292 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 LRRC19Q9H756 370 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 ADAM21Q9UKJ8 722 aa20.43■□□□□ 0.86
GMDS-201ENST00000380805 TMEM191CA6NGB0 347 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 DAPK3O43293 454 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 MED7O43513 233 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 HSF2BPO75031 334 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 CILPO75339 1184 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 KRT19P08727 400 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 WDR72Q3MJ13 1102 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 PRAMEF19Q5SWL8 479 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 SCARA5Q6ZMJ2 495 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 KATNAL2Q8IYT4 538 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 MAIP1Q8WWC4 291 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 SCLT1Q96NL6 688 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 APBA2Q99767 749 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 NEUROG2Q9H2A3 272 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 VPS18Q9P253 973 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 NXF1Q9UBU9 619 aaKnown RBP20.42■□□□□ 0.86
GMDS-201ENST00000380805 IP6K2Q9UHH9 426 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 GJD2Q9UKL4 321 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 CEP83Q9Y592 693 aa20.42■□□□□ 0.86
GMDS-201ENST00000380805 PODXLO00592 558 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 TLR3O15455 904 aaKnown RBP20.41■□□□□ 0.86
GMDS-201ENST00000380805 RARAP10276 462 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 P4HA1P13674 534 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 HOXC8P31273 242 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 RGS2P41220 211 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 CPT1AP50416 773 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 LACTBP83111 547 aaPredicted RBP20.41■□□□□ 0.86
GMDS-201ENST00000380805 INCA1Q0VD86 236 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 HLTFQ14527 1009 aaKnown RBP eCLIP20.41■□□□□ 0.863e-7■□□□□ 10.9
GMDS-201ENST00000380805 MFSD10Q14728 455 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 TTC27Q6P3X3 843 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 RHOT1Q8IXI2 618 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 TTC39CQ8N584 583 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 PIK3R5Q8WYR1 880 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 LRRC45Q96CN5 670 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 WBP1LQ9NX94 342 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 RASAL2Q9UJF2 1139 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 STRIP2Q9ULQ0 834 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 TCRBV7S2A1N4TA0A589 114 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 OPA1O60313 960 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 GBP1P32455 592 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 KIZQ2M2Z5 673 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 ZNF394Q53GI3 561 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 SPDYCQ5MJ68 293 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 SLC27A1Q6PCB7 646 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 ADAT2Q7Z6V5 191 aaKnown RBP20.41■□□□□ 0.86
GMDS-201ENST00000380805 DDX42Q86XP3 938 aaKnown RBP eCLIP20.41■□□□□ 0.86
GMDS-201ENST00000380805 NIPA2Q8N8Q9 360 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 C3orf20Q8ND61 904 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 MAGOHBQ96A72 148 aaKnown RBP20.41■□□□□ 0.86
GMDS-201ENST00000380805 C18orf8Q96DM3 657 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 TRIM51Q9BSJ1 452 aa20.41■□□□□ 0.86
GMDS-201ENST00000380805 ECM2O94769 699 aaPredicted RBP20.4■□□□□ 0.86
GMDS-201ENST00000380805 DARSP14868 501 aaKnown RBP20.4■□□□□ 0.86
GMDS-201ENST00000380805 POLR2BP30876 1174 aaKnown RBP20.4■□□□□ 0.86
GMDS-201ENST00000380805 SSTR3P32745 418 aaPredicted RBP20.4■□□□□ 0.86
GMDS-201ENST00000380805 COILP38432 576 aaPredicted RBP20.4■□□□□ 0.86
GMDS-201ENST00000380805 PSEN2P49810 448 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 GUCY2FP51841 1108 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 RBP5P82980 135 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 LRRC38Q5VT99 294 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 CCDC137Q6PK04 289 aaKnown RBP20.4■□□□□ 0.86
GMDS-201ENST00000380805 SLC4A11Q8NBS3 891 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 RIN2Q8WYP3 895 aaPredicted RBP20.4■□□□□ 0.86
GMDS-201ENST00000380805 HPDLQ96IR7 371 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 ZIM3Q96PE6 472 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 CFHR5Q9BXR6 569 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 SMYD3Q9H7B4 428 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 ZDHHC18Q9NUE0 388 aa20.4■□□□□ 0.86
GMDS-201ENST00000380805 GOLGA8KD6RF30 607 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 AXLP30530 894 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 CYP2C19P33261 490 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 RAP1GAPP47736 663 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 ZNF252P-AS1Q0IIN9 211 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 CCL14Q16627 93 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 CFAP58Q5T655 872 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 PHLDB2Q86SQ0 1253 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 EXD1Q8NHP7 514 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 FAM129AQ9BZQ8 928 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 DPP3Q9NY33 737 aa20.39■□□□□ 0.86
GMDS-201ENST00000380805 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.39■□□□□ 0.86
GMDS-201ENST00000380805 CYP2C9P11712 490 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 TAS2R40P59535 323 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 PTPN11Q06124 597 aaPredicted RBP20.39■□□□□ 0.85
GMDS-201ENST00000380805 KLF1Q13351 362 aaPredicted RBP20.39■□□□□ 0.85
GMDS-201ENST00000380805 HIC1Q14526 733 aa20.39■□□□□ 0.85
GMDS-201ENST00000380805 ZBTB6Q15916 424 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms