RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
HERC6-203ENST00000380265 MPP4Q96JB8 637 aa12.81□□□□□ -0.36
HERC6-203ENST00000380265 NACC1Q96RE7 527 aa12.81□□□□□ -0.36
HERC6-203ENST00000380265 PAFAH2Q99487 392 aa12.81□□□□□ -0.36
HERC6-203ENST00000380265 POLR3CQ9BUI4 534 aaPredicted RBP12.81□□□□□ -0.36
HERC6-203ENST00000380265 TLE6Q9H808 572 aa12.81□□□□□ -0.36
HERC6-203ENST00000380265 DCCP43146 1447 aa12.81□□□□□ -0.36
HERC6-203ENST00000380265 UMODL1Q5DID0 1318 aa12.81□□□□□ -0.36
HERC6-203ENST00000380265 ABHD2P08910 425 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 SNHG28P0DPA3 235 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 GCAP28676 217 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 SCNN1DP51172 638 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 LMNB2Q03252 620 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 HIF1AQ16665 826 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 NR1H4Q96RI1 486 aaPredicted RBP12.8□□□□□ -0.36
HERC6-203ENST00000380265 C10orf88Q9H8K7 445 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 TOPORSQ9NS56 1045 aaPredicted RBP12.8□□□□□ -0.36
HERC6-203ENST00000380265 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.8□□□□□ -0.36
HERC6-203ENST00000380265 SEL1LQ9UBV2 794 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 MEI4A8MW99 385 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 DNALI1O14645 258 aaPredicted RBP12.8□□□□□ -0.36
HERC6-203ENST00000380265 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 MTA2O94776 668 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 PGM3O95394 542 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 RHBDL3P58872 404 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 CTC1Q2NKJ3 1217 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 GRAMD1BQ3KR37 738 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 PYDC1Q8WXC3 89 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 EBF3Q9H4W6 596 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 RREB1Q92766 1687 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 CYP3A7-CYP3A51PA0A087WV96 503 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 SLC26A4O43511 780 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 CYP3A7P24462 503 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 SLC1A1P43005 524 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 TAS2R40P59535 323 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 TMPRSS15P98073 1019 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 LIN9Q5TKA1 542 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 SESTD1Q86VW0 696 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 CBWD2Q8IUF1 395 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 ARID3BQ8IVW6 561 aaPredicted RBP12.8□□□□□ -0.36
HERC6-203ENST00000380265 SNRNP27Q8WVK2 155 aaKnown RBP12.8□□□□□ -0.36
HERC6-203ENST00000380265 DNAJC1Q96KC8 554 aaKnown RBP12.8□□□□□ -0.36
HERC6-203ENST00000380265 ZWILCHQ9H900 591 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 DMAC2Q9NW81 257 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 KANSL3Q9P2N6 904 aa12.8□□□□□ -0.36
HERC6-203ENST00000380265 PPP1R1BQ9UD71 204 aaPredicted RBP12.8□□□□□ -0.36
HERC6-203ENST00000380265 CYP1A1P04798 512 aaPredicted RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 CDK7P50613 346 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 ASPHQ12797 758 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 CDC16Q13042 620 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 SYDE2Q5VT97 1194 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 PRPF39Q86UA1 669 aaKnown RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 RBM15BQ8NDT2 890 aaKnown RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 PPP1R14CQ8TAE6 165 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 SEMA4DQ92854 862 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 PTCD3Q96EY7 689 aaKnown RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 TMEM121Q9BTD3 319 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 A8MXQ7 604 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 TYROBPO43914 113 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 FOSP01100 380 aaPredicted RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 MMEL1Q495T6 779 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 PADI6Q6TGC4 694 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 LCA5Q86VQ0 697 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 FBXO27Q8NI29 283 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 PPP2R3CQ969Q6 453 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 LENG9Q96B70 501 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 ACCSQ96QU6 501 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 SHCBP1LQ9BZQ2 653 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 VAV3Q9UKW4 847 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 SPATA31A1Q5TZJ5 1347 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 RNASEH1O60930 286 aaKnown RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 INHBAP08476 426 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 IRX4P78413 519 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 DBN1Q16643 649 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 CEP70Q8NHQ1 597 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 ZNF398Q8TD17 642 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 TAS1R2Q8TE23 839 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 ACAP3Q96P50 834 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 LXNQ9BS40 222 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 CYP4F11Q9HBI6 524 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 TMEM165Q9HC07 324 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 DNAAF2Q9NVR5 837 aaKnown RBP12.79□□□□□ -0.36
HERC6-203ENST00000380265 PPM1HQ9ULR3 514 aa12.79□□□□□ -0.36
HERC6-203ENST00000380265 SLC16A4O15374 487 aa12.78□□□□□ -0.36
HERC6-203ENST00000380265 TLR3O15455 904 aaKnown RBP12.78□□□□□ -0.36
HERC6-203ENST00000380265 SETSIPP0DME0 302 aa12.78□□□□□ -0.36
HERC6-203ENST00000380265 FDX1P10109 184 aa12.78□□□□□ -0.36
HERC6-203ENST00000380265 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
HERC6-203ENST00000380265 TPP2P29144 1249 aaPredicted RBP12.78□□□□□ -0.36
HERC6-203ENST00000380265 YWHAGP61981 247 aaKnown RBP eCLIP12.78□□□□□ -0.36
HERC6-203ENST00000380265 Q4G0T1 1027 aa12.78□□□□□ -0.36
HERC6-203ENST00000380265 TMPRSS6Q8IU80 811 aa12.78□□□□□ -0.36
HERC6-203ENST00000380265 MIS12Q9H081 205 aa12.78□□□□□ -0.36
HERC6-203ENST00000380265 EURLQ9NYK6 297 aa12.78□□□□□ -0.36
HERC6-203ENST00000380265 SLC24A2Q9UI40 661 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms