RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TMEM176AQ96HP8 235 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 CABYRO75952 493 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 RPLP2P05387 115 aaKnown RBP18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 PTPN11Q06124 597 aaPredicted RBP18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 SOX4Q06945 474 aaPredicted RBP18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 PLEKHA7Q6IQ23 1121 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 PPP1R2P3Q6NXS1 205 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 DENND1BQ6P3S1 775 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 LRRC52Q8N7C0 313 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 TMEM35BQ8NCS4 154 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 SELENOOQ9BVL4 669 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 ZNF446Q9NWS9 450 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 ANAPC7Q9UJX3 599 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 BARX2Q9UMQ3 279 aaPredicted RBP18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 MEIS3P2A8K0S8 358 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 PIRO00625 290 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 MARCKSL1P49006 195 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 NDST1P52848 882 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 MAMLD1Q13495 774 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 TRIM71Q2Q1W2 868 aaKnown RBP18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 LIN9Q5TKA1 542 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 TSPAN18Q96SJ8 248 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 ZNF518BQ9C0D4 1074 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 TMEM59LQ9UK28 342 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 SNX9Q9Y5X1 595 aa18.45■□□□□ 0.54
THUMPD2-201ENST00000378727 MIF4GDA9UHW6 222 aaKnown RBP18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 PTGESO14684 152 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 TLR3O15455 904 aaKnown RBP18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 VSNL1P62760 191 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 PTK7Q13308 1070 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 SLAIN1Q8ND83 568 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.44■□□□□ 0.544e-8■□□□□ 10.1
THUMPD2-201ENST00000378727 LRRC1Q9BTT6 524 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 LHX5Q9H2C1 402 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 FAM124BQ9H5Z6 455 aaPredicted RBP18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 GOLGA2P5Q9HBQ8 144 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 CHST12Q9NRB3 414 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 FAM105AQ9NUU6 356 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 ARGLU1Q9NWB6 273 aaPredicted RBP18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 CEP350Q5VT06 3117 aa18.44■□□□□ 0.54
THUMPD2-201ENST00000378727 MED7O43513 233 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 CD4P01730 458 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 PEX5P50542 639 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 FBXO47Q5MNV8 452 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 ZFP42Q96MM3 310 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 MRPL45Q9BRJ2 306 aaKnown RBP18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 CARD9Q9H257 536 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 ERVK-5Q9HDB9 667 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 CYTH4Q9UIA0 394 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 NME7Q9Y5B8 376 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 TCRBV5S1A1TA0A578 114 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 MOXD2PA6NHM9 499 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 PGRMC1O00264 195 aaKnown RBP18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 GPR182O15218 404 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 YY1P25490 414 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 GRK4P32298 578 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 HDAC7Q8WUI4 952 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 WNT8AQ9H1J5 351 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 HMX1Q9NP08 348 aaPredicted RBP18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 TTC7AQ9ULT0 858 aaPredicted RBP18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
THUMPD2-201ENST00000378727 TARSL2A2RTX5 802 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 SPTLC1O15269 473 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 SPOPO43791 374 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 GJB6O95452 261 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 GHRP10912 638 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 CD52P31358 61 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 MRPS25P82663 173 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 WDR93Q6P2C0 686 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 MTERF4Q7Z6M4 381 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 TTC39CQ8N584 583 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 GSTCDQ8NEC7 633 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 HEXIM2Q96MH2 286 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 GLT1D1Q96MS3 346 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 CEP83Q9Y592 693 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 CCDC151A5D8V7 595 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 O00370 1275 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 XPOTO43592 962 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 CALB1P05937 261 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 VDRP11473 427 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 CYP3A5P20815 502 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 CTNNA2P26232 953 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 CTNNA1P35221 906 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 ZNF211Q13398 564 aaPredicted RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 LPIN1Q14693 890 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 BRD3Q15059 726 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 SOWAHAQ2M3V2 549 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 FAM26DQ5JW98 314 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 CC2D1AQ6P1N0 951 aaPredicted RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 UBL4BQ8N7F7 174 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 RNPC3Q96LT9 517 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 PPP1R10Q96QC0 940 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 TSEN34Q9BSV6 310 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 NT5C1AQ9BXI3 368 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 MRPL47Q9HD33 250 aaKnown RBP18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 SAGE1Q9NXZ1 904 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 NOD1Q9Y239 953 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 PTCH2Q9Y6C5 1203 aa18.42■□□□□ 0.54
THUMPD2-201ENST00000378727 SCINQ9Y6U3 715 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms