RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 MBOAT7Q96N66 472 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 COL16A1Q07092 1604 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 NHSL1Q5SYE7 1610 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 AKAP5P24588 427 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 PCK1P35558 622 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 SLC13A5Q86YT5 568 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 CASZ1Q86V15 1759 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 NUP188Q5SRE5 1749 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 OR1G1P47890 313 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 FKBP1BP68106 108 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 PTPN11Q06124 597 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 MFSD10Q14728 455 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 ABRAQ8N0Z2 381 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 TLR10Q9BXR5 811 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 CICQ96RK0 1608 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 GIPC1O14908 333 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 ALDH1A1P00352 501 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 MAGOHP61326 146 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 DCAF6Q58WW2 860 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 SPATA2LQ8IUW3 424 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 GANQ9H2C0 597 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 HSD3B7Q9H2F3 369 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 ASB7Q9H672 318 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 TMEM134Q9H6X4 195 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 STRCP1A6NGW2 1772 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 VDRP11473 427 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 YY1P25490 414 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 GRIK1P39086 918 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 PDIA2Q13087 525 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 FSCN1Q16658 493 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 FAM117BQ6P1L5 589 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 FOXR2Q6PJQ5 311 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 NOP9Q86U38 636 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 SOCS4Q8WXH5 440 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 ERP44Q9BS26 406 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 RNF19AQ9NV58 838 aa14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 FNDC3AQ9Y2H6 1198 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-203ENST00000378679 PHF20L1A8MW92 1017 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 GPR182O15218 404 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 TRPA1O75762 1119 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 SLC4A1P02730 911 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 PSEN2P49810 448 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 INHBEP58166 350 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 HIBCHQ6NVY1 386 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 LRRC31Q6UY01 552 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 PLPPR4Q7Z2D5 763 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 SRRM1Q8IYB3 904 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 ZBED8Q8IZ13 594 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 H3BRJ5 948 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 RBP3P10745 1247 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 GARSP41250 739 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 GUCY1A3Q02108 690 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 MEI1Q5TIA1 1274 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 RGMBQ6NW40 437 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 CXCL17Q6UXB2 119 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 PCGF5Q86SE9 256 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 PCSK9Q8NBP7 692 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 SCYL1Q96KG9 808 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 PRDM5Q9NQX1 630 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 A0A0A6YYK5 440 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 SLC15A5A6NIM6 579 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 CRCPO75575 148 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 PRKCIP41743 596 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 AP1B1Q10567 949 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 BYSLQ13895 437 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 SEPT6Q14141 434 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 SYCP2LQ5T4T6 812 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 SLC27A1Q6PCB7 646 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 KIAA0319LQ8IZA0 1049 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 VPS52Q8N1B4 723 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 EMC1Q8N766 993 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 CCDC68Q9H2F9 335 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 KIAA1257Q9ULG3 409 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 LTBP4Q8N2S1 1624 aa14.92□□□□□ -0.02
SHROOM1-203ENST00000378679 RCCD1A6NED2 376 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 GPD1P21695 349 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 SULT1E1P49888 294 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 CLEC16AQ2KHT3 1053 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 KCNT1Q5JUK3 1230 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 TAF2Q6P1X5 1199 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 RAPH1Q70E73 1250 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 EPS8L1Q8TE68 723 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 C9orf72Q96LT7 481 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 CNOT10Q9H9A5 744 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 STRCQ7RTU9 1775 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 WDR91A4D1P6 747 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 APOL1O14791 398 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 RTP1P59025 263 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 MAP2K5Q13163 448 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 MTM1Q13496 603 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 FAM133BQ5BKY9 247 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 PID1Q7Z2X4 250 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 TMEM176AQ96HP8 235 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 BCAS3Q9H6U6 928 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 XPNPEP3Q9NQH7 507 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 DONSONQ9NYP3 566 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms