RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 GSTA4O15217 222 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 KITP10721 976 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 NAMPTP43490 491 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 CPT1AP50416 773 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 C4orf19Q8IY42 314 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 DTNBP1Q96EV8 351 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 MCF2P10911 925 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 CASP2P42575 452 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 ITGA8P53708 1063 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 TPI1P60174 286 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 FUT2Q10981 343 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 GLB1LQ6UWU2 654 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 KDM7AQ6ZMT4 941 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 GTF3C4Q9UKN8 822 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 DLG5Q8TDM6 1919 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 CDR2Q01850 454 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 CREG2Q8IUH2 290 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 C4orf33Q8N1A6 199 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 MTMR9Q96QG7 549 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 VPS33BQ9H267 617 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 KCNQ5Q9NR82 932 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 PEAK1Q9H792 1746 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 CCDC195A0A1B0GUA6 201 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 FAM86B1E9PN63 330 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 HNRNPCL1O60812 293 aaKnown RBP15.75■□□□□ 0.11
NPHP4-201ENST00000378156 FAM86B2P0C5J1 330 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 SULT1E1P49888 294 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 CACNB2Q08289 660 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-201ENST00000378156 WDR59Q6PJI9 974 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 SLC13A1Q9BZW2 595 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 PLEKHA5Q9HAU0 1116 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 AIPL1Q9NZN9 384 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 TMEM120BA0PK00 339 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 KBTBD13C9JR72 458 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 PDE2AO00408 941 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-201ENST00000378156 GRAP2O75791 330 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 PCSK1P29120 753 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 C1orf146Q5VVC0 180 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 ACTRT1Q8TDG2 376 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 SLC20A1Q8WUM9 679 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 NEU2Q9Y3R4 380 aa15.75■□□□□ 0.11
NPHP4-201ENST00000378156 KPNA7A9QM74 516 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 EPHB6O15197 1021 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 CLCN3P51790 818 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 SV2CQ496J9 727 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 SEZ6Q53EL9 994 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 OR6P1Q8NGX9 317 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 SIK3Q9Y2K2 1263 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 KCNN4O15554 427 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 DDNO94850 711 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 GARTP22102 1010 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 FKBP1AP62942 108 aaKnown RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 PRAMEP78395 509 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 ZNF484Q5JVG2 852 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 FKBP1CQ5VVH2 108 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 C15orf52Q6ZUT6 534 aaKnown RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 SPATA20Q8TB22 786 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 CEP19Q96LK0 163 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 AGO4Q9HCK5 861 aaKnown RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 ARL2BPQ9Y2Y0 163 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 MAN1A2O60476 641 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 ZNF189O75820 626 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 NPTXRO95502 500 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 PDHA1P08559 390 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 OCRLQ01968 901 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 ZFPM1Q8IX07 1006 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 HIPK4Q8NE63 616 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 FBXO25Q8TCJ0 367 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 ATG4AQ8WYN0 398 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 OSBPL1AQ9BXW6 950 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 PABPC3Q9H361 631 aaKnown RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 NDE1Q9NXR1 346 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 TJP2Q9UDY2 1190 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 UBR1Q8IWV7 1749 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 RCCD1A6NED2 376 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 RNF225M0QZC1 329 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 NNMTP40261 264 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 ARFIP2P53365 341 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 CUL2Q13617 745 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 C16orf87Q6PH81 154 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 PLEKHH3Q7Z736 793 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 MYCBPAPQ8TBZ2 947 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 FGD4Q96M96 766 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 POP1Q99575 1024 aaKnown RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 SPATC1LQ9H0A9 340 aa15.74■□□□□ 0.11
NPHP4-201ENST00000378156 USP15Q9Y4E8 981 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-201ENST00000378156 ITGB3P05106 788 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 DSG3P32926 999 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 COPS2P61201 443 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 SREBF2Q12772 1141 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 TMTC4Q5T4D3 741 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 ZC4H2Q9NQZ6 224 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 ATRNO75882 1429 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 CFAP69A5D8W1 941 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 PCYT1AP49585 367 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 OLFML3Q9NRN5 406 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 GAKO14976 1311 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 DPYSL4O14531 572 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 APRTP07741 180 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms