RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SRFP11831 508 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 ALDH1A3P47895 512 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 SMARCB1Q12824 385 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 DUSP4Q13115 394 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 DUOXA2Q1HG44 320 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 SLC5A9Q2M3M2 681 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 SLC39A12Q504Y0 691 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 CYP4A22Q5TCH4 519 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 LMBRD2Q68DH5 695 aaPredicted RBP18.11■□□□□ 0.49
HMGN4-201ENST00000377575 TMEM86AQ8N2M4 240 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 SLC44A3Q8N4M1 653 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 KIAA0895Q8NCT3 520 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 C2orf15Q8WU43 125 aaKnown RBP18.11■□□□□ 0.49
HMGN4-201ENST00000377575 ING5Q8WYH8 240 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 BORCS6Q96GS4 357 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 TMEM209Q96SK2 561 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 ZCWPW1Q9H0M4 648 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 GDPD2Q9HCC8 539 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 SIX4Q9UIU6 781 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 PTPRJQ12913 1337 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 NARSO43776 548 aaKnown RBP18.1■□□□□ 0.49
HMGN4-201ENST00000377575 MICAL2O94851 1124 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 KIF20AO95235 890 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 RPN1P04843 607 aaKnown RBP18.1■□□□□ 0.49
HMGN4-201ENST00000377575 DLATP10515 647 aaKnown RBP18.1■□□□□ 0.49
HMGN4-201ENST00000377575 EPHB3P54753 998 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 TSPY1Q01534 308 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 CYP24A1Q07973 514 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 STK4Q13043 487 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 PSMD6Q15008 389 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 PRSS36Q5K4E3 855 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 CENPPQ6IPU0 288 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 KRBA2Q6ZNG9 492 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 DCP1BQ8IZD4 617 aaKnown RBP18.1■□□□□ 0.49
HMGN4-201ENST00000377575 RDH13Q8NBN7 331 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 CXorf38Q8TB03 319 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 SPATA18Q8TC71 538 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 CGRRF1Q99675 332 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 PRRX2Q99811 253 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 GOLPH3LQ9H4A5 285 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 GDAP2Q9NXN4 497 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 CEP72Q9P209 647 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 MUC6Q6W4X9 2439 aa18.1■□□□□ 0.49
HMGN4-201ENST00000377575 GOLGA6L4A6NEF3 574 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 EXOC3O60645 756 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 PDGFBP01127 241 aaPredicted RBP18.09■□□□□ 0.49
HMGN4-201ENST00000377575 CEBPBP17676 345 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 TNNI1P19237 187 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 PARM1Q6UWI2 310 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 PDCL2Q8N4E4 241 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 TOP6BLQ8N6T0 577 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 ATAD1Q8NBU5 361 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 OR5B17Q8NGF7 314 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 SPPL2BQ8TCT7 592 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 FGF14Q92915 247 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 FAM122AQ96E09 287 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 FAM84AQ96KN4 292 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 RTP3Q9BQQ7 232 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 CRISPLD1Q9H336 500 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 L1RE1Q9UN81 338 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 ASB3Q9Y575 518 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 SNX9Q9Y5X1 595 aa18.09■□□□□ 0.49
HMGN4-201ENST00000377575 WDFY4Q6ZS81 3184 aa18.08■□□□□ 0.49
HMGN4-201ENST00000377575 ZNF202O95125 648 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 CFHP08603 1231 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 PRR29P0C7W0 189 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 PLA2G5P39877 138 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 TUFMP49411 452 aaKnown RBP18.08■□□□□ 0.48
HMGN4-201ENST00000377575 EPHA5P54756 1037 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 MYL7Q01449 175 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 VEPH1Q14D04 833 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 ITIH5Q86UX2 942 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 ADGRF2Q8IZF7 708 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 SIX5Q8N196 739 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 CCDC127Q96BQ5 260 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 HPDLQ96IR7 371 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 SEPT5Q99719 369 aaPredicted RBP18.08■□□□□ 0.48
HMGN4-201ENST00000377575 WNT16Q9UBV4 365 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 SLC27A5Q9Y2P5 690 aa18.08■□□□□ 0.48
HMGN4-201ENST00000377575 NUP210Q8TEM1 1887 aaPredicted RBP18.07■□□□□ 0.48
HMGN4-201ENST00000377575 RHOBTB3O94955 611 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 MYL4P12829 197 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 LHX1P48742 406 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 VCPP55072 806 aaKnown RBP18.07■□□□□ 0.48
HMGN4-201ENST00000377575 DPYDQ12882 1025 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 NFE2Q16621 373 aaPredicted RBP18.07■□□□□ 0.48
HMGN4-201ENST00000377575 MGAT5BQ3V5L5 792 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 TRAPPC11Q7Z392 1133 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 HS6ST3Q8IZP7 471 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 TTC9BQ8N6N2 239 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 TMEM174Q8WUU8 243 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 TCEAL4Q96EI5 215 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 MCRS1Q96EZ8 462 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 ACBD6Q9BR61 282 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 DNAJC25Q9H1X3 360 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 SLC2A4RGQ9NR83 387 aa18.07■□□□□ 0.48
HMGN4-201ENST00000377575 DDX43Q9NXZ2 648 aaKnown RBP18.07■□□□□ 0.48
HMGN4-201ENST00000377575 ABI2Q9NYB9 513 aaPredicted RBP18.07■□□□□ 0.48
HMGN4-201ENST00000377575 PDXKO00764 312 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 CALUO43852 315 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms