RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SERPING1P05155 500 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 PLEKP08567 350 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-203ENST00000377344 PDGFRBP09619 1106 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 PDE6CP51160 858 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 MEA1Q16626 185 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 CEP57Q86XR8 500 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 TMEM86AQ8N2M4 240 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 COLGALT1Q8NBJ5 622 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 CCDC112Q8NEF3 446 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 KBTBD7Q8WVZ9 684 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 CHP1Q99653 195 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 GDF15Q99988 308 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 DEF6Q9H4E7 631 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 AAASQ9NRG9 546 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 DSEQ9UL01 958 aa13.82□□□□□ -0.2
CBWD3-203ENST00000377344 LAMA2P24043 3122 aaKnown RBP13.82□□□□□ -0.2
CBWD3-203ENST00000377344 SOWAHDA6NJG2 315 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 GRXCR1A8MXD5 290 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 CD19P15391 556 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 WARSP23381 471 aaKnown RBP13.81□□□□□ -0.2
CBWD3-203ENST00000377344 GNA15P30679 374 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 BPIFB4P59827 614 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 INCA1Q0VD86 236 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 FAM171A1Q5VUB5 890 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 HGSNATQ68CP4 663 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 FAM109BQ6ICB4 259 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-203ENST00000377344 FUT10Q6P4F1 479 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 TMTC1Q8IUR5 882 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 BCL7CQ8WUZ0 217 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-203ENST00000377344 TMEM169Q96HH4 297 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 TMEM176AQ96HP8 235 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 IGSF21Q96ID5 467 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 TWNKQ96RR1 684 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.81□□□□□ -0.2
CBWD3-203ENST00000377344 NT5C1AQ9BXI3 368 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 GPR62Q9BZJ7 368 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 ELOVL4Q9GZR5 314 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 FAM124BQ9H5Z6 455 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-203ENST00000377344 SEPT11Q9NVA2 429 aaKnown RBP13.81□□□□□ -0.2
CBWD3-203ENST00000377344 DDX43Q9NXZ2 648 aaKnown RBP13.81□□□□□ -0.2
CBWD3-203ENST00000377344 ARHGAP20Q9P2F6 1191 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 CNTN6Q9UQ52 1028 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 PCDHB12Q9Y5F1 795 aa13.81□□□□□ -0.2
CBWD3-203ENST00000377344 BZW2Q9Y6E2 419 aaKnown RBP13.81□□□□□ -0.2
CBWD3-203ENST00000377344 LCHNA4D1U4 455 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 HCRTO43612 131 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 CYP11B1P15538 503 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 LMO2P25791 158 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 TKTP29401 623 aaKnown RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 LHX1P48742 406 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 RAD23BP54727 409 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 ELAVL2Q12926 359 aaKnown RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 OVOS1Q6IE37 1185 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 LIMS2Q7Z4I7 341 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 ACOT1Q86TX2 421 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 TMEM139Q8IV31 216 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 WHAMMQ8TF30 809 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 SLC20A1Q8WUM9 679 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 CCDC42Q96M95 316 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 HEXIM2Q96MH2 286 aaKnown RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 DNAI2Q9GZS0 605 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 KCNF1Q9H3M0 494 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 NHEJ1Q9H9Q4 299 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 SPG21Q9NZD8 308 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 THAP12O43422 761 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 MYOGP15173 224 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 ACAT1P24752 427 aaKnown RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 EIF4A3P38919 411 aaKnown RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 PRKCIP41743 596 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 ZNF132P52740 706 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 CCZ1BP86790 482 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 CCZ1P86791 482 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 YWHAHQ04917 246 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 ZNF571Q7Z3V5 609 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 NOP9Q86U38 636 aaKnown RBP13.8□□□□□ -0.2
CBWD3-203ENST00000377344 VPS36Q86VN1 386 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 UNC93AQ86WB7 457 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 OSTM1Q86WC4 334 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 SLC4A11Q8NBS3 891 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 EPS8L1Q8TE68 723 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 B3GALT6Q96L58 329 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 PDCL3Q9H2J4 239 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 DPEP3Q9H4B8 488 aa13.8□□□□□ -0.2
CBWD3-203ENST00000377344 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 GABRDO14764 452 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 AKR1B10O60218 316 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 CYP11A1P05108 521 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 PAEPP09466 180 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 FAM163BP0C2L3 166 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 TYMPP19971 482 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
CBWD3-203ENST00000377344 SSTR3P32745 418 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-203ENST00000377344 PPM1AP35813 382 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 PSMC1P62191 440 aaKnown RBP13.79□□□□□ -0.2
CBWD3-203ENST00000377344 CDK17Q00537 523 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 THEM5Q8N1Q8 247 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms