RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 HIPK4Q8NE63 616 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 HPDLQ96IR7 371 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 RILPQ96NA2 401 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 PPP1R12CQ9BZL4 782 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 SHCBP1LQ9BZQ2 653 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 SNTG2Q9NY99 539 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 KIF22Q14807 665 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 PTGISQ16647 500 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 CLEC16AQ2KHT3 1053 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 B3GNT5Q9BYG0 378 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 PCDH10Q9P2E7 1040 aa12.31□□□□□ -0.44
DDR1-227ENST00000376570 TSR3Q9UJK0 312 aaKnown RBP12.31□□□□□ -0.44
DDR1-227ENST00000376570 H0YCG3 227 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 MCF2LO15068 1137 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 SH3PXD2AQ5TCZ1 1133 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 RPAINQ86UA6 219 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 FEZF2Q8TBJ5 459 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 ACTRT1Q8TDG2 376 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 HELQQ8TDG4 1101 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 EPN3Q9H201 632 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 SNX25Q9H3E2 840 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 RAB6BQ9NRW1 208 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 NEU2Q9Y3R4 380 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 LACTBL1A8MY62 500 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 KCNN4O15554 427 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 USP2O75604 605 aaPredicted RBP12.3□□□□□ -0.44
DDR1-227ENST00000376570 ZBED1O96006 694 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 RBP3P10745 1247 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 FECHP22830 423 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 GCKP35557 465 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 EIF3EP60228 445 aaKnown RBP12.3□□□□□ -0.44
DDR1-227ENST00000376570 BYSLQ13895 437 aaKnown RBP12.3□□□□□ -0.44
DDR1-227ENST00000376570 GLIS1Q8NBF1 620 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 JOSD2Q8TAC2 188 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 ACTL9Q8TC94 416 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 SPON1Q9HCB6 807 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 PARVAQ9NVD7 372 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 SCAMP3O14828 347 aaKnown RBP12.3□□□□□ -0.44
DDR1-227ENST00000376570 CELF2O95319 508 aaKnown RBP12.3□□□□□ -0.44
DDR1-227ENST00000376570 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
DDR1-227ENST00000376570 GH1P01241 217 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 PRKCIP41743 596 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 CRADDP78560 199 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 JADE1Q6IE81 842 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 C11orf63Q6NUN7 778 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 CES3Q6UWW8 571 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 FAM131BQ86XD5 332 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
DDR1-227ENST00000376570 FIZ1Q96SL8 496 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 SENP7Q9BQF6 1050 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 MRIQ9BWK5 157 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 MINDY3Q9H8M7 445 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 GDF3Q9NR23 364 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 KCND2Q9NZV8 630 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 HMGXB4Q9UGU5 601 aa12.3□□□□□ -0.44
DDR1-227ENST00000376570 A6NJR5 290 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 PODXLO00592 558 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 CD48P09326 243 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 PRLRP16471 622 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 ZNF200P98182 395 aaPredicted RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 OTUD4Q01804 1114 aaKnown RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 FASTKD3Q14CZ7 662 aaKnown RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 RWDD4Q6NW29 188 aaKnown RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 FAM71AQ8IYT1 594 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 CCDC110Q8TBZ0 833 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 GRK7Q8WTQ7 553 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 HVCN1Q96D96 273 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 SNF8Q96H20 258 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 SMC6Q96SB8 1091 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 STMN4Q9H169 189 aaPredicted RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 UBP1Q9NZI7 540 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 PFASO15067 1338 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 CITO14578 2027 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 DDX3YO15523 660 aaKnown RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 AVILO75366 819 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 TJP3O95049 919 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 ADORA2AP29274 412 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 CPA2P48052 419 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 JAM2P57087 298 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 PTENP60484 403 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 ITKQ08881 620 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 SHC3Q92529 594 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 MAML1Q92585 1016 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 MBOAT7Q96N66 472 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 TGS1Q96RS0 853 aaKnown RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 UBXN6Q9BZV1 441 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 TMBIM4Q9HC24 238 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 ABT1Q9ULW3 272 aaKnown RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 A0A1B0GUA9 196 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 TOM1L1O75674 476 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 INHBAP08476 426 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 BCAR1P56945 870 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 ADCY2Q08462 1091 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms