RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 AARSP49588 968 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDPN-203ENST00000376061 RAD23BP54727 409 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 BPIFB4P59827 614 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 KRT83P78385 493 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 FMO1Q01740 532 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 IKBKEQ14164 716 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 UPP1Q16831 310 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 SOWAHAQ2M3V2 549 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 LIMS2Q7Z4I7 341 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 ABI1Q8IZP0 508 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 TMEM199Q8N511 208 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 WHAMMQ8TF30 809 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 RABGGTAQ92696 567 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 DDX27Q96GQ7 796 aaKnown RBP11.16□□□□□ -0.62
PDPN-203ENST00000376061 UROC1Q96N76 676 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 MMS19Q96T76 1030 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 MRPL45Q9BRJ2 306 aaKnown RBP11.16□□□□□ -0.62
PDPN-203ENST00000376061 ELOVL4Q9GZR5 314 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 NAGPAQ9UK23 515 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 PCDHA13Q9Y5I0 950 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 ABHD14A-ACY1A0A1B0GW23 586 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 DDHD2O94830 711 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 TNFAIP3P21580 790 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 BRD2P25440 801 aaKnown RBP11.16□□□□□ -0.62
PDPN-203ENST00000376061 ARHGAP25P42331 645 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 VAV2P52735 878 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 NDST1P52848 882 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 ORC1Q13415 861 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 ZNF394Q53GI3 561 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 KIAA1328Q86T90 577 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 ZNF677Q86XU0 584 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 ZNF280BQ86YH2 543 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 C7orf61Q8IZ16 206 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 TOP6BLQ8N6T0 577 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 SLC4A11Q8NBS3 891 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 KBTBD7Q8WVZ9 684 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 CASD1Q96PB1 797 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 PCDHB18PQ96TA0 734 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 ZSWIM1Q9BR11 485 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 SEPT11Q9NVA2 429 aaKnown RBP11.16□□□□□ -0.62
PDPN-203ENST00000376061 KANSL3Q9P2N6 904 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 BARX2Q9UMQ3 279 aaPredicted RBP11.16□□□□□ -0.62
PDPN-203ENST00000376061 TFR2Q9UP52 801 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 NME7Q9Y5B8 376 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 ATP8B3O60423 1300 aa11.15□□□□□ -0.62
PDPN-203ENST00000376061 VWA8A3KMH1 1905 aa11.15□□□□□ -0.62
PDPN-203ENST00000376061 GOLGA6L9A6NEM1 432 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 F8W810 466 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 THAP12O43422 761 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 TACC1O75410 805 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 KIF4AO95239 1232 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 PAEPP09466 180 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 ACRP10323 421 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 WARSP23381 471 aaKnown RBP11.15□□□□□ -0.63
PDPN-203ENST00000376061 MAGEA1P43355 309 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 WDR5P61964 334 aaKnown RBP11.15□□□□□ -0.63
PDPN-203ENST00000376061 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.63
PDPN-203ENST00000376061 PAN2Q504Q3 1202 aaKnown RBP11.15□□□□□ -0.63
PDPN-203ENST00000376061 CCDC122Q5T0U0 273 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 ALKBH5Q6P6C2 394 aaKnown RBP11.15□□□□□ -0.63
PDPN-203ENST00000376061 CD300LGQ6UXG3 332 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 ZNF662Q6ZS27 426 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 COLGALT2Q8IYK4 626 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 PDCL2Q8N4E4 241 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 APPL2Q8NEU8 664 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 RSPH1Q8WYR4 309 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 TFAP2BQ92481 460 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 SENP8Q96LD8 212 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 PACSIN1Q9BY11 444 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 MRPL9Q9BYD2 267 aaKnown RBP11.15□□□□□ -0.63
PDPN-203ENST00000376061 LACRTQ9GZZ8 138 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 IL23AQ9NPF7 189 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 LZTFL1Q9NQ48 299 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 TAS2R14Q9NYV8 317 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 HCSTQ9UBK5 93 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 DNAJB4Q9UDY4 337 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 TRIM10Q9UDY6 481 aa11.15□□□□□ -0.63
PDPN-203ENST00000376061 TBKBP1A7MCY6 615 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 I3L4J1 428 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 CYB561D2O14569 222 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 HCRTO43612 131 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 HUS1O60921 280 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 EFCAB14O75071 495 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 B3GAT3O94766 335 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 BAIAP3O94812 1187 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 ABL1P00519 1130 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 ITGB1P05556 798 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 CFHP08603 1231 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 DEFB103AP81534 67 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 CLEC16AQ2KHT3 1053 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 TIGD5Q53EQ6 642 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 C10orf76Q5T2E6 689 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 DCLRE1AQ6PJP8 1040 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 TRIM72Q6ZMU5 477 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 NYAP1Q6ZVC0 841 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 OSTM1Q86WC4 334 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms