RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ZNF606Q8WXB4 792 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 ELMO3Q96BJ8 720 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 HOMER3Q9NSC5 361 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.71□□□□□ -1.02
UBR4-202ENST00000375224 SLC5A4Q9NY91 659 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 PSTPIP1O43586 416 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 HOXC6P09630 235 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 ECHS1P30084 290 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 CLCN3P51790 818 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 MYL6P60660 151 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 TAP1Q03518 808 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 PLEKHA7Q6IQ23 1121 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 MICALCLQ6ZW33 695 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 DPP9Q86TI2 863 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 JAMLQ86YT9 394 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 THNSL1Q8IYQ7 743 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 ARL10Q8N8L6 244 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 TMEM35BQ8NCS4 154 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 B4GALNT2Q8NHY0 566 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 TRAPPC12Q8WVT3 735 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 RIN2Q8WYP3 895 aaPredicted RBP8.71□□□□□ -1.02
UBR4-202ENST00000375224 BTBD6Q96KE9 485 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 FMO2Q99518 471 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 CELF4Q9BZC1 486 aaKnown RBP8.71□□□□□ -1.02
UBR4-202ENST00000375224 TMEM165Q9HC07 324 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 CHORDC1Q9UHD1 332 aaPredicted RBP8.71□□□□□ -1.02
UBR4-202ENST00000375224 MROH7Q68CQ1 1323 aa8.71□□□□□ -1.02
UBR4-202ENST00000375224 FAM170AA1A519 330 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 TTLL13PA6NNM8 815 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 BTBD19C9JJ37 291 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 FSCN2O14926 492 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 CST3P01034 146 aaPredicted RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 RPSAP08865 295 aaKnown RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 MARCKSL1P49006 195 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 CCDC137Q6PK04 289 aaKnown RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 RUFY4Q6ZNE9 571 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 SYDE1Q6ZW31 735 aaPredicted RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 APBB1IPQ7Z5R6 666 aaPredicted RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 ADAT2Q7Z6V5 191 aaKnown RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 TAX1BP1Q86VP1 789 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 RHOT1Q8IXI2 618 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 PRELID2Q8N945 189 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 MS4A4AQ96JQ5 239 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 FAM84AQ96KN4 292 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 PARK7Q99497 189 aaKnown RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 TRIM4Q9C037 500 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 CDT1Q9H211 546 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 RNPEPQ9H4A4 650 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 ZNF408Q9H9D4 720 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 ERVK-5Q9HDB9 667 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 CISHQ9NSE2 258 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 MTRF1LQ9UGC7 380 aaKnown RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 IP6K2Q9UHH9 426 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 BLOC1S6Q9UL45 172 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBR4-202ENST00000375224 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 PASKQ96RG2 1323 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 MED7O43513 233 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 P4HA1P13674 534 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 ATICP31939 592 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 COILP38432 576 aaPredicted RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 IGBP1P78318 339 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 CDC42EP1Q00587 391 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 TRADDQ15628 312 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 GPR162Q16538 588 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 SPATA21Q7Z572 469 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 DDX42Q86XP3 938 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBR4-202ENST00000375224 CCDC50Q8IVM0 306 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 CCDC105Q8IYK2 499 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 FEZF2Q8TBJ5 459 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 GRK7Q8WTQ7 553 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 EZH1Q92800 747 aaPredicted RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 C11orf70Q9BRQ4 267 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 DPH5Q9H2P9 285 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 FAM124BQ9H5Z6 455 aaPredicted RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 ASB7Q9H672 318 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 LRRC19Q9H756 370 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 BATF3Q9NR55 127 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 PCDHGC3Q9UN70 934 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 AKT3Q9Y243 479 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 NR2E1Q9Y466 385 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 EVPLQ92817 2033 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 ZSWIM8A7E2V4 1837 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 UMODL1Q5DID0 1318 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 HMGB1P1B2RPK0 211 aaPredicted RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 HSD17B3P37058 310 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 PTGIRP43119 386 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 EIF3BP55884 814 aaKnown RBP8.7□□□□□ -1.02
UBR4-202ENST00000375224 KIRREL3Q8IZU9 778 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 LINC01465Q8N7H1 131 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 C2orf69Q8N8R5 385 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 PLAAQ9Y263 795 aa8.7□□□□□ -1.02
UBR4-202ENST00000375224 MMP8P22894 467 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 EIF4BP23588 611 aaKnown RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 POLR2BP30876 1174 aaKnown RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 RAB27AP51159 221 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 ACTN3Q08043 901 aaPredicted RBP8.69□□□□□ -1.02
UBR4-202ENST00000375224 MAMLD1Q13495 774 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 ZNF667Q5HYK9 610 aa8.69□□□□□ -1.02
UBR4-202ENST00000375224 IQSEC1Q6DN90 963 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms