RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CBX2Q14781 532 aaPredicted RBP22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 SOWAHAQ2M3V2 549 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 UVSSAQ2YD98 709 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 LIN9Q5TKA1 542 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 RNF19BQ6ZMZ0 732 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 C15orf39Q6ZRI6 1047 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 LIMS2Q7Z4I7 341 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 THEM5Q8N1Q8 247 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 OR10T2Q8NGX3 314 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ZNF707Q96C28 371 aaPredicted RBP22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 RIPOR3Q96MK2 946 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 XYLT2Q9H1B5 865 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 EPHX3Q9H6B9 360 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ZDHHC7Q9NXF8 308 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 AFF4Q9UHB7 1163 aaKnown RBP22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 XIRP2A4UGR9 3374 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 SEC24AO95486 1093 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 STAU1O95793 577 aaKnown RBP22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ELF1P32519 619 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 MTHFRP42898 656 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 GCLMP48507 274 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 GPR17Q13304 367 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 NCOA4Q13772 614 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 PPM1LQ5SGD2 360 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 DPH6Q7L8W6 267 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 FILIP1Q7Z7B0 1213 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 OSTM1Q86WC4 334 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TMEM86AQ8N2M4 240 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 MLKLQ8NB16 471 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 SLC7A14Q8TBB6 771 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 SYAP1Q96A49 352 aaPredicted RBP22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 CEP63Q96MT8 703 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 LRFN3Q9BTN0 628 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 PRKD2Q9BZL6 878 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 HCN4Q9Y3Q4 1203 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 SCN1AP35498 2009 aa22.53■■□□□ 1.2
MAP1LC3A-202ENST00000374837 VNN2O95498 520 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 MBD3O95983 291 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ADCY1Q08828 1119 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 WDR72Q3MJ13 1102 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 CCDC149Q6ZUS6 474 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TCEAL8Q8IYN2 117 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 NECTIN4Q96NY8 510 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 RHOBTB2Q9BYZ6 727 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ZCWPW1Q9H0M4 648 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 MMRN2Q9H8L6 949 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 CYP4F11Q9HBI6 524 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 PRKAG3Q9UGI9 489 aa22.52■■□□□ 1.2
MAP1LC3A-202ENST00000374837 GABRDO14764 452 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 HNRNPA1P09651 372 aaKnown RBP eCLIP22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 GTF2H1P32780 548 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 NLRP12P59046 1061 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 CYP26C1Q6V0L0 522 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 RTL10Q7L3V2 364 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 LRRTM3Q86VH5 581 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ADHFE1Q8IWW8 467 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ADGRF2Q8IZF7 708 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 SPATA18Q8TC71 538 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 SMG7Q92540 1137 aaKnown RBP22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ELMO3Q96BJ8 720 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 PGLYRP2Q96PD5 576 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 MED15Q96RN5 788 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 MMS19Q96T76 1030 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 PHF7Q9BWX1 381 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 POMKQ9H5K3 350 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 VRTNQ9H8Y1 702 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 TMEM8AQ9HCN3 771 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 DDX43Q9NXZ2 648 aaKnown RBP22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 NXF1Q9UBU9 619 aaKnown RBP22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ARMCX3Q9UH62 379 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 RWDD2AQ9UIY3 292 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 MAFFQ9ULX9 164 aa22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ARIH1Q9Y4X5 557 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3A-202ENST00000374837 PRRG1O14668 218 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 CCL16O15467 120 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 HLA-DRAP01903 254 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 HOXA9P31269 272 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 LHX1P48742 406 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ZP2Q05996 745 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 SGSM1Q2NKQ1 1148 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ZNF699Q32M78 642 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 FRMD5Q7Z6J6 570 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 KBTBD7Q8WVZ9 684 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 SRRTQ9BXP5 876 aaKnown RBP22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 PIDD1Q9HB75 910 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 METTL14Q9HCE5 456 aaKnown RBP22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 POLIQ9UNA4 740 aa22.5■■□□□ 1.19
MAP1LC3A-202ENST00000374837 PLXNA3P51805 1871 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 MTMR11A4FU01 709 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 HCRTO43612 131 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 FAM163BP0C2L3 166 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 WARSP23381 471 aaKnown RBP22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 TNNC1P63316 161 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 MYL7Q01449 175 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 SLC39A12Q504Y0 691 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ZNF667Q5HYK9 610 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 TCERG1LQ5VWI1 586 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 KRT39Q6A163 491 aa22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 RBM43Q6ZSC3 357 aaKnown RBP22.49■■□□□ 1.19
MAP1LC3A-202ENST00000374837 ATAD1Q8NBU5 361 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms