RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SEPT12Q8IYM1 358 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 MYCT1Q8N699 235 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 NSUN7Q8NE18 718 aaKnown RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 FBF1Q8TES7 1133 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 HSPH1Q92598 858 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 ANKS1AQ92625 1134 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 KRT35Q92764 455 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 TUBGCP3Q96CW5 907 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 CHFRQ96EP1 664 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 IFT74Q96LB3 600 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 PURBQ96QR8 312 aaKnown RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 CAMKK2Q96RR4 588 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 HAUS8Q9BT25 410 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 NTMT1Q9BV86 223 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 BBS2Q9BXC9 721 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 AGXT2Q9BYV1 514 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 DENND2DQ9H6A0 471 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 PAQR5Q9NXK6 330 aaPredicted RBP8.37□□□□□ -1.07
USP48-203ENST00000374732 TBC1D14Q9P2M4 693 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 CHMP2BQ9UQN3 213 aa8.37□□□□□ -1.07
USP48-203ENST00000374732 HEG1Q9ULI3 1381 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 AOX1Q06278 1338 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 PRR5-ARHGAP8B1AHC4 643 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 ZC3H11AO75152 810 aaKnown RBP eCLIP8.36□□□□□ -1.071e-8■■□□□ 14.5
USP48-203ENST00000374732 DAB1O75553 588 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 DNAJB5O75953 348 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 PRLP01236 227 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 HOXB1P14653 301 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 H2AFXP16104 143 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 IFNA8P32881 189 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 CLCN6P51797 869 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 IKBKEQ14164 716 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 HERC3Q15034 1050 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 FAM47CQ5HY64 1035 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 FAM209BQ5JX69 171 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 DEPDC1Q5TB30 811 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 BRAPQ7Z569 592 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 GALNT12Q8IXK2 581 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 CARFQ8N187 725 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 PCSK9Q8NBP7 692 aaKnown RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 DIS3LQ8TF46 1054 aaKnown RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 SYN2Q92777 582 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 EXT2Q93063 718 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 RPRD1AQ96P16 312 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 STK33Q9BYT3 514 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 GCOM2Q9BZD3 368 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 UCKL1Q9NWZ5 548 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 LARSQ9P2J5 1176 aaKnown RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 TRIM10Q9UDY6 481 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 FETUBQ9UGM5 382 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 USH1CQ9Y6N9 552 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 FAM169AQ9Y6X4 670 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 LY75O60449 1722 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 COL5A2P05997 1499 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 SALL3Q9BXA9 1300 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 C1orf232A0A0U1RR37 186 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 NUTM2BA6NNL0 878 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 NUTM2EB1AL46 878 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 PIK3CDO00329 1044 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 LIN7AO14910 233 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 MEFVO15553 781 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 MAP3K13O43283 966 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 PALMO75781 387 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 PRPF6O94906 941 aaKnown RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 FAM13AO94988 1023 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 ATP5F1P24539 256 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 ARSDP51689 593 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 COPB1P53618 953 aaKnown RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 NRLP54845 237 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 FOXK2Q01167 660 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 NCF4Q15080 339 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 ZNF674Q2M3X9 581 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 SPATS1Q496A3 300 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 PPP1R26Q5T8A7 1209 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 ZNF852Q6ZMS4 543 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 TMPRSS9Q7Z410 1059 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 WDR49Q8IV35 697 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 NUTM2AQ8IVF1 878 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 Q8NFD4 153 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 OR56B2PQ8NGI1 322 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 CEP76Q8TAP6 659 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 DENND1AQ8TEH3 1009 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 LTV1Q96GA3 475 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 NUDCD1Q96RS6 583 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 SRA1Q9HD15 236 aaKnown RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 ZNF215Q9UL58 517 aaPredicted RBP8.36□□□□□ -1.07
USP48-203ENST00000374732 PCDHGA8Q9Y5G5 932 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 PARP3Q9Y6F1 533 aa8.36□□□□□ -1.07
USP48-203ENST00000374732 A0A1B0GWJ7 208 aa8.35□□□□□ -1.07
USP48-203ENST00000374732 MACROD2A1Z1Q3 448 aa8.35□□□□□ -1.07
USP48-203ENST00000374732 A6NHS1 94 aa8.35□□□□□ -1.07
USP48-203ENST00000374732 F6X3S4 739 aa8.35□□□□□ -1.07
USP48-203ENST00000374732 DYNC1LI2O43237 492 aaPredicted RBP8.35□□□□□ -1.07
USP48-203ENST00000374732 CLN5O75503 358 aa8.35□□□□□ -1.07
USP48-203ENST00000374732 LONP1P36776 959 aaKnown RBP8.35□□□□□ -1.07
USP48-203ENST00000374732 DGKGP49619 791 aa8.35□□□□□ -1.07
USP48-203ENST00000374732 PTK2Q05397 1052 aa8.35□□□□□ -1.07
USP48-203ENST00000374732 NCAPHQ15003 741 aa8.35□□□□□ -1.07
USP48-203ENST00000374732 NFIL3Q16649 462 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms