RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 TCEAL5Q5H9L2 206 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 CBWD3Q5JTY5 395 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 CBWD5Q5RIA9 395 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 KIAA0319Q5VV43 1072 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 KRT39Q6A163 491 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.9□□□□□ -0.82
RBBP4-201ENST00000373485 FAM114A1Q8IWE2 563 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 TRIM59Q8IWR1 403 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 LRRC52Q8N7C0 313 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 MRPL43Q8N983 215 aaKnown RBP9.9□□□□□ -0.82
RBBP4-201ENST00000373485 TAS1R2Q8TE23 839 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 PI4K2AQ9BTU6 479 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 NSUN3Q9H649 340 aaKnown RBP9.9□□□□□ -0.82
RBBP4-201ENST00000373485 IGFLR1Q9H665 355 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 TMEM8AQ9HCN3 771 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 FANCLQ9NW38 375 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 LMCD1Q9NZU5 365 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 STK39Q9UEW8 545 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.9□□□□□ -0.82
RBBP4-201ENST00000373485 SNX9Q9Y5X1 595 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 SCN1AP35498 2009 aa9.9□□□□□ -0.82
RBBP4-201ENST00000373485 KCNJ18B7U540 433 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 M0QZQ0 153 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 SYN3O14994 580 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 LRRN2O75325 713 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 ODC1P11926 461 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 POU3F3P20264 500 aaPredicted RBP9.9□□□□□ -0.83
RBBP4-201ENST00000373485 GTF2H1P32780 548 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 GTF2F1P35269 517 aaKnown RBP eCLIP9.9□□□□□ -0.83
RBBP4-201ENST00000373485 NRIP1P48552 1158 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 AARSP49588 968 aaKnown RBP eCLIP9.9□□□□□ -0.834e-6■■■■■ 30.6
RBBP4-201ENST00000373485 MARSP56192 900 aaKnown RBP9.9□□□□□ -0.83
RBBP4-201ENST00000373485 MCCD1P59942 119 aaPredicted RBP9.9□□□□□ -0.83
RBBP4-201ENST00000373485 KCNH2Q12809 1159 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 KCNJ12Q14500 433 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 PSMD5Q16401 504 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 ZNF699Q32M78 642 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 WDR72Q3MJ13 1102 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 SPOPLQ6IQ16 392 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 PDE12Q6L8Q7 609 aaKnown RBP9.9□□□□□ -0.83
RBBP4-201ENST00000373485 C15orf39Q6ZRI6 1047 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 APPL2Q8NEU8 664 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 MMS19Q96T76 1030 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 TLE6Q9H808 572 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 NXF1Q9UBU9 619 aaKnown RBP9.9□□□□□ -0.83
RBBP4-201ENST00000373485 SSX2IPQ9Y2D8 614 aa9.9□□□□□ -0.83
RBBP4-201ENST00000373485 MYO7AQ13402 2215 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 BECN2A8MW95 431 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 PES1O00541 588 aaKnown RBP9.89□□□□□ -0.83
RBBP4-201ENST00000373485 TEX28O15482 410 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 HUS1O60921 280 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 LILRB3O75022 631 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 CNPP09543 421 aaKnown RBP9.89□□□□□ -0.83
RBBP4-201ENST00000373485 PAX3P23760 479 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 KLRC2P26717 231 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 ATICP31939 592 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 FMO5P49326 533 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 ARPP19P56211 112 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 TNNC1P63316 161 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 MYL7Q01449 175 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 YWHAHQ04917 246 aaPredicted RBP9.89□□□□□ -0.83
RBBP4-201ENST00000373485 NCAPHQ15003 741 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 SGSM1Q2NKQ1 1148 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 CTXN3Q4LDR2 81 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 TCP11X2Q5H9J9 407 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 WSCD1Q658N2 575 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 ANKS3Q6ZW76 656 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 METTL23Q86XA0 190 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 DHX40Q8IX18 779 aaKnown RBP9.89□□□□□ -0.83
RBBP4-201ENST00000373485 SCUBE3Q8IX30 993 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 FBXL13Q8NEE6 735 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 LNX1Q8TBB1 728 aaPredicted RBP9.89□□□□□ -0.83
RBBP4-201ENST00000373485 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 SEMA4DQ92854 862 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 PPP2R3CQ969Q6 453 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 KLHL5Q96PQ7 755 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 BPIFA3Q9BQP9 254 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 EMILIN2Q9BXX0 1053 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 IMPG2Q9BZV3 1241 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 XYLT2Q9H1B5 865 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 CBX8Q9HC52 389 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 RAB20Q9NX57 234 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 GDAP2Q9NXN4 497 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 POLIQ9UNA4 740 aa9.89□□□□□ -0.83
RBBP4-201ENST00000373485 PRRC2BQ5JSZ5 2229 aaKnown RBP9.89□□□□□ -0.83
RBBP4-201ENST00000373485 VWA8A3KMH1 1905 aa9.88□□□□□ -0.83
RBBP4-201ENST00000373485 ATG2AQ2TAZ0 1938 aa9.88□□□□□ -0.83
RBBP4-201ENST00000373485 SMTNL1A8MU46 457 aa9.88□□□□□ -0.83
RBBP4-201ENST00000373485 H7C4K7 107 aa9.88□□□□□ -0.83
RBBP4-201ENST00000373485 ADAM12O43184 909 aa9.88□□□□□ -0.83
RBBP4-201ENST00000373485 N4BP1O75113 896 aaKnown RBP9.88□□□□□ -0.83
RBBP4-201ENST00000373485 CLASP2O75122 1294 aaKnown RBP9.88□□□□□ -0.83
RBBP4-201ENST00000373485 ASS1P00966 412 aaKnown RBP9.88□□□□□ -0.83
RBBP4-201ENST00000373485 AFPP02771 609 aaKnown RBP9.88□□□□□ -0.83
RBBP4-201ENST00000373485 TYMPP19971 482 aa9.88□□□□□ -0.83
RBBP4-201ENST00000373485 CDK11BP21127 795 aaKnown RBP9.88□□□□□ -0.83
RBBP4-201ENST00000373485 OR1D2P34982 312 aa9.88□□□□□ -0.83
RBBP4-201ENST00000373485 RAP1GAPP47736 663 aa9.88□□□□□ -0.83
RBBP4-201ENST00000373485 RBM10P98175 930 aaKnown RBP9.88□□□□□ -0.83
RBBP4-201ENST00000373485 HYAL1Q12794 435 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms