RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 ING2Q9H160 280 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 TXLNGQ9NUQ3 528 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 FHOD1Q9Y613 1164 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 H7C4K7 107 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 FGFR2P21802 821 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 HARS2P49590 506 aaKnown RBP10.26□□□□□ -0.77
COL4A6-202ENST00000372216 FBXW10Q5XX13 1052 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 FOXR1Q6PIV2 292 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 PCSK9Q8NBP7 692 aaKnown RBP10.26□□□□□ -0.77
COL4A6-202ENST00000372216 CENPKQ9BS16 269 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 MFSD1Q9H3U5 465 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 STARD7Q9NQZ5 370 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 V9GYQ6 96 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 KDM4FA0A1W2PPD8 638 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 HSPA1AP0DMV8 641 aaKnown RBP10.26□□□□□ -0.77
COL4A6-202ENST00000372216 HSPA1BP0DMV9 641 aaKnown RBP10.26□□□□□ -0.77
COL4A6-202ENST00000372216 FDPSP14324 419 aaKnown RBP10.26□□□□□ -0.77
COL4A6-202ENST00000372216 UCHL3P15374 230 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 CLCN3P51790 818 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 DMC1Q14565 340 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 PATL1Q86TB9 770 aaKnown RBP10.26□□□□□ -0.77
COL4A6-202ENST00000372216 DPF2Q92785 391 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 OSBPL10Q9BXB5 764 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 NAGPAQ9UK23 515 aa10.26□□□□□ -0.77
COL4A6-202ENST00000372216 CCDC151A5D8V7 595 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 C5orf58C9J3I9 102 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 EFTUD2Q15029 972 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 PCNX4Q63HM2 1172 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 GPAT2Q6NUI2 795 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 FAM47EQ6ZV65 393 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 VN1R5Q7Z5H4 357 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 GPC2Q8N158 579 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 CCDC33Q8N5R6 958 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 ZNF614Q8N883 585 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 SYT2Q8N9I0 419 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 NIF3L1Q9GZT8 377 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 METTL5Q9NRN9 209 aaKnown RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 FAM187AA6NFU0 413 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 DNAJC8O75937 253 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 ATP1A1P05023 1023 aaKnown RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 PDAP1Q13442 181 aaKnown RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 TOMM20Q15388 145 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 DCAF6Q58WW2 860 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 MAGED4Q96JG8 741 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 SERPINI1Q99574 410 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 UPF3AQ9H1J1 476 aaKnown RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 CCDC85CA6NKD9 419 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 H0Y3Z8 333 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 PSMD3O43242 534 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 FAM200BP0CF97 657 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 MCF2P10911 925 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 YY1P25490 414 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 ESRRGP62508 458 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 PIGHQ14442 188 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 ANKRD49Q8WVL7 239 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 DCTN4Q9UJW0 460 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 UBQLN1Q9UMX0 589 aaKnown RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 MAP2P11137 1827 aaKnown RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 TAL1P17542 331 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 EDRF1Q3B7T1 1238 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 CYP4A22Q5TCH4 519 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 RNPC3Q96LT9 517 aaKnown RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 PNKPQ96T60 521 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 CATSPERBQ9H7T0 1116 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 MANSC4A6NHS7 340 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 C3orf70A6NLC5 250 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 MAPK13O15264 365 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 NCAM1P13591 858 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 GPD1P21695 349 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 POLE2P56282 527 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 SESN2P58004 480 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-202ENST00000372216 NCAPHQ15003 741 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 GPRC5CQ9NQ84 441 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 PITPNM2Q9BZ72 1349 aa10.25□□□□□ -0.77
COL4A6-202ENST00000372216 DCTN3O75935 186 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 MMEP08473 750 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 NR1H3Q13133 447 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 NUGGCQ68CJ6 796 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 WDR75Q8IWA0 830 aaKnown RBP10.24□□□□□ -0.77
COL4A6-202ENST00000372216 KCNV2Q8TDN2 545 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 JADE3Q92613 823 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 YME1L1Q96TA2 773 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 PITPNM3Q9BZ71 974 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 AGO4Q9HCK5 861 aaKnown RBP10.24□□□□□ -0.77
COL4A6-202ENST00000372216 PKP3Q9Y446 797 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 ESYT3A0FGR9 886 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 NFIBO00712 420 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 CYP11B2P19099 503 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 HMOX2P30519 316 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 AARSP49588 968 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL4A6-202ENST00000372216 KLK7P49862 253 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 SKOR1P84550 965 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 KIF2CQ99661 725 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 SPATC1LQ9H0A9 340 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 UVRAGQ9P2Y5 699 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 MCM8Q9UJA3 840 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms