RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 GPR20Q99678 358 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 MRPL4Q9BYD3 311 aaKnown RBP15.02□□□□□ -0.01
LDB3-204ENST00000372066 GOLPH3Q9H4A6 298 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.02□□□□□ -0.01
LDB3-204ENST00000372066 RAPGEFL1Q9UHV5 662 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 MTUS1Q9ULD2 1270 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 PCDHB2Q9Y5E7 798 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 SCN5AQ14524 2016 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 IGKV6-21A0A0C4DH24 114 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 HSF2BPO75031 334 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 MMEP08473 750 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 HOXD8P13378 290 aaPredicted RBP15.01□□□□□ -0.01
LDB3-204ENST00000372066 NLRP11P59045 1033 aaKnown RBP15.01□□□□□ -0.01
LDB3-204ENST00000372066 HIC1Q14526 733 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 CLEC16AQ2KHT3 1053 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 TRAF7Q6Q0C0 670 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 BRSK2Q8IWQ3 736 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 GDPD5Q8WTR4 605 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 TGS1Q96RS0 853 aaKnown RBP15.01□□□□□ -0.01
LDB3-204ENST00000372066 RUFY1Q96T51 708 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 PCDHB18PQ96TA0 734 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 AVENQ9NQS1 362 aaPredicted RBP15.01□□□□□ -0.01
LDB3-204ENST00000372066 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.01□□□□□ -0.01
LDB3-204ENST00000372066 VPS18Q9P253 973 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 ADAM21Q9UKJ8 722 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 ALG6Q9Y672 507 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 PRRC2BQ5JSZ5 2229 aaKnown RBP15.01□□□□□ -0.01
LDB3-204ENST00000372066 ANK1P16157 1881 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 GBF1Q92538 1859 aa15.01□□□□□ -0.01
LDB3-204ENST00000372066 CCDC66A2RUB6 948 aa15□□□□□ -0.01
LDB3-204ENST00000372066 GOLGA8KD6RF30 607 aa15□□□□□ -0.01
LDB3-204ENST00000372066 SART1O43290 800 aaKnown RBP15□□□□□ -0.01
LDB3-204ENST00000372066 TOM1L1O75674 476 aa15□□□□□ -0.01
LDB3-204ENST00000372066 CTNNA2P26232 953 aa15□□□□□ -0.01
LDB3-204ENST00000372066 THPOP40225 353 aa15□□□□□ -0.01
LDB3-204ENST00000372066 TFDP1Q14186 410 aa15□□□□□ -0.01
LDB3-204ENST00000372066 TDRD10Q5VZ19 366 aaKnown RBP15□□□□□ -0.01
LDB3-204ENST00000372066 CRELD2Q6UXH1 353 aaPredicted RBP15□□□□□ -0.01
LDB3-204ENST00000372066 KLHL7Q8IXQ5 586 aa15□□□□□ -0.01
LDB3-204ENST00000372066 EFCAB13Q8IY85 973 aa15□□□□□ -0.01
LDB3-204ENST00000372066 ZNF564Q8TBZ8 553 aaPredicted RBP15□□□□□ -0.01
LDB3-204ENST00000372066 ZNF516Q92618 1163 aa15□□□□□ -0.01
LDB3-204ENST00000372066 GLG1Q92896 1179 aa15□□□□□ -0.01
LDB3-204ENST00000372066 ZNF653Q96CK0 615 aa15□□□□□ -0.01
LDB3-204ENST00000372066 RUNDC3BQ96NL0 473 aa15□□□□□ -0.01
LDB3-204ENST00000372066 ZSWIM1Q9BR11 485 aa15□□□□□ -0.01
LDB3-204ENST00000372066 C16orf70Q9BSU1 422 aa15□□□□□ -0.01
LDB3-204ENST00000372066 TARS2Q9BW92 718 aaKnown RBP15□□□□□ -0.01
LDB3-204ENST00000372066 PLVAPQ9BX97 442 aa15□□□□□ -0.01
LDB3-204ENST00000372066 CCDC113Q9H0I3 377 aa15□□□□□ -0.01
LDB3-204ENST00000372066 RAB17Q9H0T7 212 aa15□□□□□ -0.01
LDB3-204ENST00000372066 SMARCAD1Q9H4L7 1026 aa15□□□□□ -0.01
LDB3-204ENST00000372066 LMCD1Q9NZU5 365 aa15□□□□□ -0.01
LDB3-204ENST00000372066 C17orf102A2RUQ5 167 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 FAM187AA6NFU0 413 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 ASAP2O43150 1006 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 HBP1O60381 514 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 RNF40O75150 1001 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 SYF2O95926 243 aaKnown RBP14.99□□□□□ -0.01
LDB3-204ENST00000372066 KRT5P13647 590 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 PTENP60484 403 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 ERVK-21P61565 698 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 PPFIA1Q13136 1202 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 BIRC3Q13489 604 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 DHX34Q14147 1143 aaKnown RBP14.99□□□□□ -0.01
LDB3-204ENST00000372066 MBTPS1Q14703 1052 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 SEL1L2Q5TEA6 688 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 TAF3Q5VWG9 929 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.99□□□□□ -0.01
LDB3-204ENST00000372066 WDR49Q8IV35 697 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 DBF4BQ8NFT6 615 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 CASKIN2Q8WXE0 1202 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 TATDN2Q93075 761 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 C1QTNF1Q9BXJ1 281 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 IMPG2Q9BZV3 1241 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 FAM114A2Q9NRY5 505 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 CNTN6Q9UQ52 1028 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 FAN1Q9Y2M0 1017 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 CNTNAP2Q9UHC6 1331 aa14.99□□□□□ -0.01
LDB3-204ENST00000372066 LINC01553A4QN01 128 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 H3BRB1 525 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 CLDN3O15551 220 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 FGGP02679 453 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 CARSP49589 748 aaKnown RBP14.98□□□□□ -0.01
LDB3-204ENST00000372066 ACOT2P49753 483 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 RNASE9P60153 205 aaKnown RBP14.98□□□□□ -0.01
LDB3-204ENST00000372066 CUL2Q13617 745 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 MAPK6Q16659 721 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 SERINC5Q86VE9 423 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 TET1Q8NFU7 2136 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 SEC14L1Q92503 715 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 LRRC45Q96CN5 670 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 SH3GL2Q99962 352 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 NUP85Q9BW27 656 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 TUT1Q9H6E5 874 aaKnown RBP14.98□□□□□ -0.01
LDB3-204ENST00000372066 ANKFY1Q9P2R3 1169 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 NFU1Q9UMS0 254 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 OGTO15294 1046 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 AMHP03971 560 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 PRKCBP05771 671 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms