RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 SPTLC1O15269 473 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 STX10O60499 249 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 GNA14O95837 355 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 SOD2P04179 222 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 TKTP29401 623 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 PIK3CAP42336 1068 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 MTIF2P46199 727 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 GLUD2P49448 558 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 TAF6P49848 677 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 ARPP19P56211 112 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 LILRA4P59901 499 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 MYL6P60660 151 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 MYO1EQ12965 1108 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 NCOA4Q13772 614 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 SMC1AQ14683 1233 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 SV2CQ496J9 727 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 TDRD10Q5VZ19 366 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 CD300LGQ6UXG3 332 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 ZDHHC14Q8IZN3 488 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 FLCNQ8NFG4 579 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 TMEM174Q8WUU8 243 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 CNOT6LQ96LI5 555 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 TTPALQ9BTX7 342 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 ADAM7Q9H2U9 754 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 METTL14Q9HCE5 456 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 MRPL17Q9NRX2 175 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 SIX4Q9UIU6 781 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 NFE2L3Q9Y4A8 694 aa11.51□□□□□ -0.57
EXOSC1-203ENST00000370886 SPTBN2O15020 2390 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 ANO9A1A5B4 782 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 KPNA7A9QM74 516 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 CYB561D2O14569 222 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 CST3P01034 146 aaPredicted RBP11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 RPL17P18621 184 aaKnown RBP11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 PNPLA4P41247 253 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 CDR1P51861 262 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 AP3M2P53677 418 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 C1orf220Q5T0J3 134 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 FAM114A1Q8IWE2 563 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 ZC3H3Q8IXZ2 948 aaKnown RBP11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 CCDC105Q8IYK2 499 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 BORCS6Q96GS4 357 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 SENP8Q96LD8 212 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 ZNF560Q96MR9 790 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 MMS19Q96T76 1030 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 RTP3Q9BQQ7 232 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 PI4K2AQ9BTU6 479 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 HERC2P3Q9BVR0 1158 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 ZBP1Q9H171 429 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 THAP9Q9H5L6 903 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 SAMSN1Q9NSI8 373 aaKnown RBP11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 FANCLQ9NW38 375 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 NXF1Q9UBU9 619 aaKnown RBP11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 USTQ9Y2C2 406 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 SNX9Q9Y5X1 595 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 HCFC2Q9Y5Z7 792 aa11.5□□□□□ -0.57
EXOSC1-203ENST00000370886 CACNA1GO43497 2377 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 MED19A0JLT2 244 aaPredicted RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 BECN2A8MW95 431 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 TMEM189-UBE2V1I3L0A0 370 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 IKBKBO14920 756 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 HUS1O60921 280 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 HLA-DRAP01903 254 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 LMNAP02545 664 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 C4BPAP04003 597 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 ASGR2P07307 311 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 CTSAP10619 480 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 ODC1P11926 461 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 AOC1P19801 751 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 CDK11BP21127 795 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 KLRC2P26717 231 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 ZNF165P49910 485 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 MXI1P50539 228 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 TNNC1P63316 161 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 MYL5Q02045 173 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 PUM1Q14671 1186 aaKnown RBP eCLIP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 ANGPT1Q15389 498 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 PTPN14Q15678 1187 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 PSMD5Q16401 504 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 ZNF699Q32M78 642 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 WDR72Q3MJ13 1102 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 CT47A1Q5JQC4 288 aaPredicted RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 CWF19L1Q69YN2 538 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 KRT39Q6A163 491 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 FOXR2Q6PJQ5 311 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 METTL23Q86XA0 190 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 PALB2Q86YC2 1186 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 MRPL43Q8N983 215 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 CCDC150Q8NCX0 1101 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 APPL2Q8NEU8 664 aa11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 ENOX1Q8TC92 643 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-203ENST00000370886 TAS1R2Q8TE23 839 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms