RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 CLEC4FQ8N1N0 589 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 ARHGAP18Q8N392 663 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 SMAD5Q99717 465 aaKnown RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 V9GYQ6 96 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 DCDC2CA8MYV0 355 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 LZTS3O60299 673 aaPredicted RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 ODC1P11926 461 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 TCN1P20061 433 aaPredicted RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 EPHB2P29323 1055 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 CCDC15Q0P6D6 951 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 ZNF177Q13360 481 aaPredicted RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 SPATA4Q8NEY3 305 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 RPRD1AQ96P16 312 aaPredicted RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 YME1L1Q96TA2 773 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 CHP1Q99653 195 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 LRRC1Q9BTT6 524 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 WEE1P30291 646 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 RGS2P41220 211 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 RAD23BP54727 409 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 ZNF200P98182 395 aaPredicted RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 DDX39BQ13838 428 aaKnown RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 ZNF555Q8NEP9 628 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 PKD2L2Q9NZM6 624 aa11.79□□□□□ -0.52
PDCD11-201ENST00000369797 DBR1Q9UK59 544 aaKnown RBP11.79□□□□□ -0.52
PDCD11-201ENST00000369797 ITIH6Q6UXX5 1313 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 CAMTA2O94983 1202 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 ASS1P00966 412 aaKnown RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 SLC9A1P19634 815 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 RASA1P20936 1047 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 PBLDP30039 288 aaPredicted RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 VPS72Q15906 364 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 C10orf53Q8N6V4 93 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 HASPINQ8TF76 798 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 VMP1Q96GC9 406 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 MAN1C1Q9NR34 630 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 UBXN8O00124 270 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 EXTL3O43909 919 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 PTPN7P35236 360 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 RPS6P62753 249 aaKnown RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 SKOR1P84550 965 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 LRRC36Q1X8D7 754 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 BLOC1S5Q8TDH9 187 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 STX7O15400 261 aaKnown RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 CST8O60676 142 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 PGK2P07205 417 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 ACO1P21399 889 aaKnown RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 GTF2A2P52657 109 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 BYSLQ13895 437 aaKnown RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 DPF2Q92785 391 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 MRPL1Q9BYD6 325 aaKnown RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 CCSER1Q9C0I3 900 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 DPP3Q9NY33 737 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 PHF2O75151 1096 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 CKMP06732 381 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 ACTN3Q08043 901 aaPredicted RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 EZH2Q15910 746 aaKnown RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 DEPDC1Q5TB30 811 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 ATP6V0D2Q8N8Y2 350 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 KRT35Q92764 455 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 SGF29Q96ES7 293 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 NIF3L1Q9GZT8 377 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 NMRK2Q9NPI5 230 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 DDIT4Q9NX09 232 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 ATP11BQ9Y2G3 1177 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 DGKIO75912 1065 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 SLC11A2P49281 568 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 GUCY1A3Q02108 690 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 STK4Q13043 487 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 SF3B3Q15393 1217 aaKnown RBP11.78□□□□□ -0.52
PDCD11-201ENST00000369797 LAYNQ6UX15 382 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 CARNMT1Q8N4J0 409 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 CALML6Q8TD86 181 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 FBXO28Q9NVF7 368 aa11.78□□□□□ -0.52
PDCD11-201ENST00000369797 ZNF521Q96K83 1311 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 IGSF9BQ9UPX0 1349 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.52
PDCD11-201ENST00000369797 POLBP06746 335 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 DNAJB2P25686 324 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 SPRP35270 261 aaPredicted RBP11.77□□□□□ -0.52
PDCD11-201ENST00000369797 SLC16A1P53985 500 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 PTK7Q13308 1070 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 DEFB128Q7Z7B8 93 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 CCDC33Q8N5R6 958 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 AGPAT5Q9NUQ2 364 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 SLC39A10Q9ULF5 831 aa11.77□□□□□ -0.52
PDCD11-201ENST00000369797 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 M0QYT0 321 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 TBX3O15119 743 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 MAP3K13O43283 966 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 HIST2H2ACQ16777 129 aaPredicted RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 SBK1Q52WX2 424 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms