RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PMM2O15305 246 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 TEX28O15482 410 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 LILRB3O75022 631 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 CYP11A1P05108 521 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 PDGFRBP09619 1106 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 OR4Q2P0C623 313 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 FOSL2P15408 326 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 CD58P19256 250 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 ACAT1P24752 427 aaKnown RBP14.88□□□□□ -0.03
TPM3-211ENST00000368531 KLRC2P26717 231 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 OR1D2P34982 312 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 GTF2F1P35269 517 aaKnown RBP eCLIP14.88□□□□□ -0.03
TPM3-211ENST00000368531 NRIP1P48552 1158 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 FANCCQ00597 558 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 PLCB2Q00722 1185 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 UBXN1Q04323 297 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 KCNMA1Q12791 1236 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 PTPN21Q16825 1174 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 EXOC3L4Q17RC7 722 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 TCEAL5Q5H9L2 206 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 ZNF280DQ6N043 979 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 PDXDC1Q6P996 788 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 RSPO2Q6UXX9 243 aaPredicted RBP14.88□□□□□ -0.03
TPM3-211ENST00000368531 RRAGAQ7L523 313 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 APTXQ7Z2E3 356 aaKnown RBP14.88□□□□□ -0.03
TPM3-211ENST00000368531 PALB2Q86YC2 1186 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 ARHGEF19Q8IW93 802 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 THEM5Q8N1Q8 247 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 PPM1KQ8N3J5 372 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 PCMTD1Q96MG8 357 aaPredicted RBP14.88□□□□□ -0.03
TPM3-211ENST00000368531 KLHL5Q96PQ7 755 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 TMEM209Q96SK2 561 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 EMILIN2Q9BXX0 1053 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 NIF3L1Q9GZT8 377 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 NSUN3Q9H649 340 aaKnown RBP14.88□□□□□ -0.03
TPM3-211ENST00000368531 DDX43Q9NXZ2 648 aaKnown RBP14.88□□□□□ -0.03
TPM3-211ENST00000368531 MTRRQ9UBK8 725 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 FBXL5Q9UKA1 691 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 CDY1Q9Y6F8 540 aa14.88□□□□□ -0.03
TPM3-211ENST00000368531 LAMA2P24043 3122 aaKnown RBP14.87□□□□□ -0.03
TPM3-211ENST00000368531 LRRC10BA6NIK2 292 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 LGALS16A8MUM7 142 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 OAZ2O95190 189 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 LMO2P25791 158 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 PON1P27169 355 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 GNL1P36915 607 aaPredicted RBP14.87□□□□□ -0.03
TPM3-211ENST00000368531 ASPAP45381 313 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 KLK7P49862 253 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
TPM3-211ENST00000368531 FILIP1LQ4L180 1135 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 LLGL2Q6P1M3 1020 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 GJB7Q6PEY0 223 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 TRIM65Q6PJ69 517 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 DPH6Q7L8W6 267 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 TMEM86AQ8N2M4 240 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 KBTBD7Q8WVZ9 684 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 NAP1L5Q96NT1 182 aaPredicted RBP14.87□□□□□ -0.03
TPM3-211ENST00000368531 ARID3AQ99856 593 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 RTP3Q9BQQ7 232 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 CLSTN3Q9BQT9 956 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 LSM14BQ9BX40 385 aaKnown RBP14.87□□□□□ -0.03
TPM3-211ENST00000368531 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.87□□□□□ -0.03
TPM3-211ENST00000368531 LMCD1Q9NZU5 365 aa14.87□□□□□ -0.03
TPM3-211ENST00000368531 GTPBP10A4D1E9 387 aaKnown RBP14.86□□□□□ -0.03
TPM3-211ENST00000368531 TEX33O43247 280 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 CLASP2O75122 1294 aaKnown RBP14.86□□□□□ -0.03
TPM3-211ENST00000368531 ATP2C2O75185 946 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 ADH1AP07327 375 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 SPATA31D3P0C874 917 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 CPB1P15086 417 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 WARSP23381 471 aaKnown RBP14.86□□□□□ -0.03
TPM3-211ENST00000368531 LHX1P48742 406 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 ORC1Q13415 861 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 CUL2Q13617 745 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 PHLDB3Q6NSJ2 640 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 EP400NLQ6ZTU2 488 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 SPATA31D4Q6ZUB0 917 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 OR10T2Q8NGX3 314 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 KAT5Q92993 513 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 PPP2R3CQ969Q6 453 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 BCO2Q9BYV7 579 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 RXFP1Q9HBX9 757 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 UBE2TQ9NPD8 197 aaPredicted RBP14.86□□□□□ -0.03
TPM3-211ENST00000368531 IFNKQ9P0W0 207 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 FNIP2Q9P278 1114 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 NME7Q9Y5B8 376 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 BACE2Q9Y5Z0 518 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 IRAK3Q9Y616 596 aa14.86□□□□□ -0.03
TPM3-211ENST00000368531 PRRC2BQ5JSZ5 2229 aaKnown RBP14.85□□□□□ -0.03
TPM3-211ENST00000368531 OR6C75A6NL08 312 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 A8MXQ7 604 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 GABRDO14764 452 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 TBC1D4O60343 1298 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 TACC1O75410 805 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 POU3F3P20264 500 aaPredicted RBP14.85□□□□□ -0.03
TPM3-211ENST00000368531 NDUFV1P49821 464 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 NDST1P52848 882 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 UBASH3AP57075 661 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 PSMC1P62191 440 aaKnown RBP14.85□□□□□ -0.03
TPM3-211ENST00000368531 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms