RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 FAM171A1Q5VUB5 890 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 SPOPLQ6IQ16 392 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 PDXDC1Q6P996 788 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 PPM1KQ8N3J5 372 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 APPL2Q8NEU8 664 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 AUTS2Q8WXX7 1259 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 SEMA4DQ92854 862 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 ELMO3Q96BJ8 720 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 SENP8Q96LD8 212 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 LSM14BQ9BX40 385 aaKnown RBP13.56□□□□□ -0.24
EFNA1-201ENST00000368406 TRIM5Q9C035 493 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 NIF3L1Q9GZT8 377 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.56□□□□□ -0.24
EFNA1-201ENST00000368406 GOLGA6L3A6NEY3 463 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 SPTLC1O15269 473 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 PMM2O15305 246 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 LINC01565O15544 149 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 GLP2RO95838 553 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 ASS1P00966 412 aaKnown RBP13.56□□□□□ -0.24
EFNA1-201ENST00000368406 FGFR3P22607 806 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 NDUFV1P49821 464 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 SYCP1Q15431 976 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 TJAP1Q5JTD0 557 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 TRIM65Q6PJ69 517 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.56□□□□□ -0.24
EFNA1-201ENST00000368406 EHBP1Q8NDI1 1231 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 VN1R2Q8NFZ6 395 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 CASP10Q92851 521 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 MSLNLQ96KJ4 702 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 SUSD3Q96L08 255 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 KLHL5Q96PQ7 755 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
EFNA1-201ENST00000368406 CLEC1BQ9P126 229 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 FNIP2Q9P278 1114 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 DSEQ9UL01 958 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 POLIQ9UNA4 740 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 COQ4Q9Y3A0 265 aa13.56□□□□□ -0.24
EFNA1-201ENST00000368406 C5orf42Q9H799 3197 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 TSC2P49815 1807 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 A0A1B0GTH6 734 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 C2CD2LO14523 706 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 TBX10O75333 385 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 STAU1O95793 577 aaKnown RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 ADH1AP07327 375 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 BMP1P13497 986 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 HOXB8P17481 243 aaPredicted RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 TKTP29401 623 aaKnown RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 YWHAEP62258 255 aaKnown RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 DLX2Q07687 328 aaPredicted RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 UVSSAQ2YD98 709 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 SCARA3Q6AZY7 606 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 EP400NLQ6ZTU2 488 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 APTXQ7Z2E3 356 aaKnown RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 ADGRF2Q8IZF7 708 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 NEK11Q8NG66 645 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 SLC22A17Q8WUG5 538 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 RIN2Q8WYP3 895 aaPredicted RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 PIK3R5Q8WYR1 880 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 B3GALT6Q96L58 329 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 NAP1L5Q96NT1 182 aaPredicted RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 XPO4Q9C0E2 1151 aaKnown RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 DNAI2Q9GZS0 605 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 XYLT2Q9H1B5 865 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 SNX25Q9H3E2 840 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 SMYD3Q9H7B4 428 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 TIMM13Q9Y5L4 95 aaPredicted RBP13.55□□□□□ -0.24
EFNA1-201ENST00000368406 HCFC2Q9Y5Z7 792 aa13.55□□□□□ -0.24
EFNA1-201ENST00000368406 LRRC10BA6NIK2 292 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 H3BQ06 376 aaPredicted RBP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 SYN3O14994 580 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 TEX28O15482 410 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 CD58P19256 250 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 TRIM21P19474 475 aaKnown RBP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 SLC9A1P19634 815 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 IGFBP6P24592 240 aaPredicted RBP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 KLRC2P26717 231 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 PON1P27169 355 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 RAP1GAPP47736 663 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 AARSP49588 968 aaKnown RBP eCLIP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 CLCN4P51793 760 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 YWHAHQ04917 246 aaPredicted RBP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 RTP2Q5QGT7 225 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 OVOS1Q6IE37 1185 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 LNX1Q8TBB1 728 aaPredicted RBP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 VRTNQ9H8Y1 702 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
EFNA1-201ENST00000368406 GDAP2Q9NXN4 497 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 DPP7Q9UHL4 492 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 CD207Q9UJ71 328 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 FAM50BQ9Y247 325 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 MUC3AQ02505 3323 aa13.54□□□□□ -0.24
EFNA1-201ENST00000368406 GRXCR2A6NFK2 248 aa13.53□□□□□ -0.24
EFNA1-201ENST00000368406 H7C4K7 107 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms