RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TAB3Q8N5C8 712 aaPredicted RBP20.71■□□□□ 0.91
TRIM58-201ENST00000366481 ENDOVQ8N8Q3 282 aaKnown RBP20.71■□□□□ 0.91
TRIM58-201ENST00000366481 CFAP61Q8NHU2 1237 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 RIT2Q99578 217 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 KLF6Q99612 283 aaPredicted RBP20.71■□□□□ 0.91
TRIM58-201ENST00000366481 HEY2Q9UBP5 337 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 RRM1P23921 792 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 MAGEA4P43358 317 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 ACSBG2Q5FVE4 666 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 PRAMEF18Q5VWM3 479 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 SYTL5Q8TDW5 730 aaPredicted RBP20.71■□□□□ 0.91
TRIM58-201ENST00000366481 GRK7Q8WTQ7 553 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 CLEC4DQ8WXI8 215 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 RMDN3Q96TC7 470 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 CADM1Q9BY67 442 aaKnown RBP20.71■□□□□ 0.91
TRIM58-201ENST00000366481 ATRNL1Q5VV63 1379 aa20.71■□□□□ 0.91
TRIM58-201ENST00000366481 THSD7AQ9UPZ6 1657 aa20.7■□□□□ 0.91
TRIM58-201ENST00000366481 TBX10O75333 385 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 TJP3O95049 919 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 MAPK4P31152 587 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 PRKG1Q13976 671 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 TBC1D25Q3MII6 688 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 SLC9A9Q8IVB4 645 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 ACSF2Q96CM8 615 aaPredicted RBP20.7■□□□□ 0.9
TRIM58-201ENST00000366481 FAM161BQ96MY7 647 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 MRIQ9BWK5 157 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 VCX3BQ9H321 246 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 VCX3AQ9NNX9 186 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 EDF1O60869 148 aaKnown RBP20.7■□□□□ 0.9
TRIM58-201ENST00000366481 EGFRP00533 1210 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 ACOT2P49753 483 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 NFIL3Q16649 462 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 LRRC36Q1X8D7 754 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 OTOAQ7RTW8 1153 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 HELQQ8TDG4 1101 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 ZFAND2BQ8WV99 257 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 FAM151AQ8WW52 585 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 AKT1S1Q96B36 256 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 CEP170P1Q96L14 293 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 KMT5AQ9NQR1 393 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 TBX20Q9UMR3 447 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.7■□□□□ 0.9
TRIM58-201ENST00000366481 CTDP1Q9Y5B0 961 aaPredicted RBP20.7■□□□□ 0.9
TRIM58-201ENST00000366481 MFAP3P55082 362 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 WNT7BP56706 349 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 KAZNQ674X7 775 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 KRT39Q6A163 491 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 ANO5Q75V66 913 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 NT5C1BQ96P26 610 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 UBE2OQ9C0C9 1292 aaKnown RBP20.7■□□□□ 0.9
TRIM58-201ENST00000366481 RIPK3Q9Y572 518 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 ADGRA3Q8IWK6 1321 aa20.7■□□□□ 0.9
TRIM58-201ENST00000366481 CNTNAP1P78357 1384 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 ASMTLO95671 621 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 SLC1A5Q15758 541 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 CFAP57Q96MR6 1250 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 C12orf65Q9H3J6 166 aaKnown RBP20.69■□□□□ 0.9
TRIM58-201ENST00000366481 RAB20Q9NX57 234 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 SLX4Q8IY92 1834 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 PI4K2BG5E9Z4 385 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 SMAPO00193 183 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 ZBED4O75132 1171 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 MCL1Q07820 350 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 SIX1Q15475 284 aaPredicted RBP20.69■□□□□ 0.9
TRIM58-201ENST00000366481 MDH1BQ5I0G3 518 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 SLC39A4Q6P5W5 647 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 CLNKQ7Z7G1 428 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 NRG4Q8WWG1 115 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 NDNQ99608 321 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 MIPEPQ99797 713 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 C11orf70Q9BRQ4 267 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 LRRC19Q9H756 370 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 STK32BQ9NY57 414 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 GABBR1Q9UBS5 961 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 WASF2Q9Y6W5 498 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 C10orf71Q711Q0 1435 aa20.69■□□□□ 0.9
TRIM58-201ENST00000366481 GOLGA8SH3BPF8 625 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 GOLGA8MH3BSY2 632 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 PSMG1O95456 288 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 CD58P19256 250 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 PSMC4P43686 418 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 P3H1Q32P28 736 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 RSBN1LQ6PCB5 846 aaPredicted RBP20.68■□□□□ 0.9
TRIM58-201ENST00000366481 TRAPPC9Q96Q05 1148 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 ARL8BQ9NVJ2 186 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 ICAM1P05362 532 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 PLCB3Q01970 1234 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 ATP13A4Q4VNC1 1196 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 EAPPQ56P03 285 aaPredicted RBP20.68■□□□□ 0.9
TRIM58-201ENST00000366481 FOXB2Q5VYV0 432 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 TMEM161BQ8NDZ6 487 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 ATL2Q8NHH9 583 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 SHC3Q92529 594 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 CD101Q93033 1021 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 BTBD10Q9BSF8 475 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 KCND2Q9NZV8 630 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 FEM1BQ9UK73 627 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 UBE4BO95155 1302 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 CCDC160A6NGH7 325 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 PEX10O60683 326 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms