RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 BTF3P20290 206 aaKnown RBP5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 GLDCP23378 1020 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 COPAP53621 1224 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 MXRA7P84157 204 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 TCF15Q12870 199 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 RIN1Q13671 783 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 LIN54Q6MZP7 749 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 BORAQ6PGQ7 559 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 KRT28Q7Z3Y7 464 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 XYLT1Q86Y38 959 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 YAF2Q8IY57 180 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 GALNT15Q8N3T1 639 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 STT3BQ8TCJ2 826 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 BORCS6Q96GS4 357 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 LCORQ96JN0 433 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 SNX27Q96L92 541 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 KLHL32Q96NJ5 620 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 NELL2Q99435 816 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 VKORC1Q9BQB6 163 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 SPATA5L1Q9BVQ7 753 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 MS4A7Q9GZW8 240 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 AGO3Q9H9G7 860 aaKnown RBP5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 TMEM8AQ9HCN3 771 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 MRPS18AQ9NVS2 196 aaKnown RBP5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 PDP2Q9P2J9 529 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 HDAC9Q9UKV0 1011 aa5.4□□□□□ -1.54
RNU6-1339P-201ENST00000363574 RRN3P2A6NIE6 340 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 MYO1CO00159 1063 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 EIF3FO00303 357 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 IPO5O00410 1097 aaKnown RBP5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 PIP5K1BO14986 540 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 KCNQ3O43525 872 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CNOT4O95628 575 aaKnown RBP5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CHEK2O96017 543 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ITGA5P08648 1049 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 FDXRP22570 491 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SLC6A2P23975 617 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 FSTL1Q12841 308 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TBX2Q13207 712 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CSRP2Q16527 193 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ZNF568Q3ZCX4 644 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ARHGAP15Q53QZ3 475 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 WDR78Q5VTH9 848 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TANGO2Q6ICL3 276 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 MZT2AQ6P582 158 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 KIAA0408Q6ZU52 694 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 USP49Q70CQ1 688 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 PPP1R32Q7Z5V6 425 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 PCGF5Q86SE9 256 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ZNF761Q86XN6 746 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TICAM2Q86XR7 235 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 KBTBD2Q8IY47 623 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 FAM46DQ8NEK8 389 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SHCBP1Q8NEM2 672 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 DNERQ8NFT8 737 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 RAPGEF4Q8WZA2 1011 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TCF25Q9BQ70 676 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 LSM14BQ9BX40 385 aaKnown RBP5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 EPC1Q9H2F5 836 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 USP40Q9NVE5 1235 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SCAF8Q9UPN6 1271 aaKnown RBP5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TBC1D30Q9Y2I9 924 aa5.39□□□□□ -1.55
RNU6-1339P-201ENST00000363574 A0A1W2PRX2 142 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 EYA2O00167 538 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 IRAK2O43187 625 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 KIF20AO95235 890 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 MED14OSP0DP75 135 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 BDNFP23560 247 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ACVR2AP27037 513 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 WNT3P56703 355 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SLC29A2Q14542 456 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 AMOTQ4VCS5 1084 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ATXN7L2Q5T6C5 722 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 FAM160B1Q5W0V3 765 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SULT6B1Q6IMI4 303 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 DOK3Q7L591 496 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 GPRIN1Q7Z2K8 1008 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 GPR135Q8IZ08 494 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 FITM2Q8N6M3 262 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SLC17A8Q8NDX2 589 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 TBC1D15Q8TC07 691 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 USP13Q92995 863 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ZSCAN31Q96LW9 406 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ZNF512Q96ME7 567 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 PPM1MQ96MI6 270 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 KATNAL1Q9BW62 490 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 IMPG2Q9BZV3 1241 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 SIK2Q9H0K1 926 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 HEYLQ9NQ87 328 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 HESX1Q9UBX0 185 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 FBXO9Q9UK97 447 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CAPN11Q9UMQ6 739 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 KCTD3Q9Y597 815 aa5.38□□□□□ -1.55
RNU6-1339P-201ENST00000363574 LOC102723971A0A1B0GUV8 181 aa5.37□□□□□ -1.55
RNU6-1339P-201ENST00000363574 RAB27BO00194 218 aa5.37□□□□□ -1.55
RNU6-1339P-201ENST00000363574 ASNA1O43681 348 aa5.37□□□□□ -1.55
RNU6-1339P-201ENST00000363574 PRSS23O95084 383 aa5.37□□□□□ -1.55
RNU6-1339P-201ENST00000363574 CKBP12277 381 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms