RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 JADE3Q92613 823 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 ABTB1Q969K4 478 aaPredicted RBP21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 PCMTD2Q9NV79 361 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 RNF14Q9UBS8 474 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 FHOD1Q9Y613 1164 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 ARP10275 920 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 KLRC1P26715 233 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 CAPZA2P47755 286 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 NR1H3Q13133 447 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 SIX5Q8N196 739 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 TMA16Q96EY4 203 aaKnown RBP21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 MAN1C1Q9NR34 630 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 DDIT4Q9NX09 232 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 ALDH1A2O94788 518 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 C6orf10Q5SRN2 563 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 TRIM51Q9BSJ1 452 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 CHCHD3Q9NX63 227 aaKnown RBP21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 SLC9A1P19634 815 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 CLCN6P51797 869 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 GABPB1Q06547 395 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 C10orf53Q8N6V4 93 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 LIMA1Q9UHB6 759 aaKnown RBP21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 SCAMP3O14828 347 aaKnown RBP21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 FBXO33Q7Z6M2 555 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 MAGED4Q96JG8 741 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 SYTL2Q9HCH5 934 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 PRMT7Q9NVM4 692 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 USP20Q9Y2K6 914 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 POLR1AO95602 1720 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 RNF103-CHMP3A0A140T963 221 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 ICAM1P05362 532 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 GHRP10912 638 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 GPD1P21695 349 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 ZNF614Q8N883 585 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 MRPS31Q92665 395 aaKnown RBP21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 SNTG2Q9NY99 539 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 CHMP2BQ9UQN3 213 aa21.23■□□□□ 0.99
CDC42BPB-201ENST00000361246 DDX39BQ13838 428 aaKnown RBP21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 RNPC3Q96LT9 517 aaKnown RBP21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 RUSC1Q9BVN2 902 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 SMPD4Q9NXE4 827 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 SPASTQ9UBP0 616 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 NFIBO00712 420 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 BRAFP15056 766 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 SLC30A10Q6XR72 485 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 GUF1Q8N442 669 aaKnown RBP21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 FHDC1Q9C0D6 1143 aaPredicted RBP21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 CCDC151A5D8V7 595 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 USP27XA6NNY8 438 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 EPHB2P29323 1055 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 PTGISQ16647 500 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 TRIML2Q8N7C3 387 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 CHP1Q99653 195 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 TRIM4Q9C037 500 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 GOLPH3Q9H4A6 298 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 STX18Q9P2W9 335 aaKnown RBP21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 ANGPTL2Q9UKU9 493 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 H7C4K7 107 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 AGPAT5Q9NUQ2 364 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 RHOBTB1O94844 696 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 ERAP2Q6P179 960 aa21.22■□□□□ 0.99
CDC42BPB-201ENST00000361246 DGKIO75912 1065 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 NBPF20Q3BBV1 942 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 SLC44A2Q8IWA5 706 aaPredicted RBP21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 PHACTR4Q8IZ21 702 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 RCOR2Q8IZ40 523 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 SLC39A10Q9ULF5 831 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 TCN1P20061 433 aaPredicted RBP21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 SCFD1Q8WVM8 642 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 DBR1Q9UK59 544 aaKnown RBP21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 CNTNAP2Q9UHC6 1331 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 PDXKO00764 312 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 SLC11A2P49281 568 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 EIF3BP55884 814 aaKnown RBP21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 ADGRF2Q8IZF7 708 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 MIER2Q8N344 545 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 SPATA16Q9BXB7 569 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 F5H5T6 163 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 CXCL9Q07325 125 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 LONRF1Q17RB8 773 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 HIBCHQ6NVY1 386 aaPredicted RBP21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 SPATA18Q8TC71 538 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 SEPT8Q92599 483 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 FAM161BQ96MY7 647 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 TFR2Q9UP52 801 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 FGFR1P11362 822 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 POLD3Q15054 466 aaPredicted RBP21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 ALS2CLQ60I27 953 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 TRIM9Q9C026 710 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 DDTLA6NHG4 134 aaPredicted RBP21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 EPHB3P54753 998 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 FAM71DQ8N9W8 422 aa21.21■□□□□ 0.99
CDC42BPB-201ENST00000361246 CCDC188H7C350 402 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 LMNAP02545 664 aaKnown RBP21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 ENO1P06733 434 aaKnown RBP21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 MCF2P10911 925 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 ITGB6P18564 788 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 DENND5BQ6ZUT9 1274 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms