RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 C1orf54Q8WWF1 131 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 BRI3BPQ8WY22 251 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 RAPGEF5Q92565 580 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 PGM2Q96G03 612 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 RPF1Q9H9Y2 349 aaKnown RBP23.98■■□□□ 1.43
LDB1-201ENST00000361198 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.98■■□□□ 1.43
LDB1-201ENST00000361198 PHKA2P46019 1235 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 TAS2R40P59535 323 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 AMHR2Q16671 573 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 PPP1R2P3Q6NXS1 205 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 CENPTQ96BT3 561 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 PARVAQ9NVD7 372 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 AKT3Q9Y243 479 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 RBM47A0AV96 593 aaKnown RBP23.97■■□□□ 1.43
LDB1-201ENST00000361198 VGLL3A8MV65 326 aa23.97■■□□□ 1.43
LDB1-201ENST00000361198 SNAI1O95863 264 aaPredicted RBP23.97■■□□□ 1.43
LDB1-201ENST00000361198 VTNP04004 478 aa23.97■■□□□ 1.43
LDB1-201ENST00000361198 RPL7AP62424 266 aaKnown RBP23.97■■□□□ 1.43
LDB1-201ENST00000361198 SGO2Q562F6 1265 aa23.97■■□□□ 1.43
LDB1-201ENST00000361198 ICE2Q659A1 982 aa23.97■■□□□ 1.43
LDB1-201ENST00000361198 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.97■■□□□ 1.43
LDB1-201ENST00000361198 TFAP2BQ92481 460 aa23.97■■□□□ 1.43
LDB1-201ENST00000361198 C16orf70Q9BSU1 422 aa23.97■■□□□ 1.43
LDB1-201ENST00000361198 DDX20Q9UHI6 824 aaKnown RBP23.97■■□□□ 1.43
LDB1-201ENST00000361198 IVNS1ABPQ9Y6Y0 642 aa23.97■■□□□ 1.43
LDB1-201ENST00000361198 CAND2O75155 1236 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 KRT19P08727 400 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 GTF2A2P52657 109 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 POU5F1BQ06416 359 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 FEZF2Q8TBJ5 459 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 RNF25Q96BH1 459 aaPredicted RBP23.96■■□□□ 1.43
LDB1-201ENST00000361198 RUNDC3BQ96NL0 473 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 NXF1Q9UBU9 619 aaKnown RBP23.96■■□□□ 1.43
LDB1-201ENST00000361198 PARP2Q9UGN5 583 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 POLIQ9UNA4 740 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 SLC45A1Q9Y2W3 748 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 CAPN7Q9Y6W3 813 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 MAGEB2O15479 319 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 STRNO43815 780 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 SHBGP04278 402 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 NFICP08651 508 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 IFT88Q13099 833 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 FAM187BQ17R55 369 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 EMID1Q96A84 441 aaPredicted RBP23.96■■□□□ 1.43
LDB1-201ENST00000361198 CHST7Q9NS84 486 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 SIX4Q9UIU6 781 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 USTQ9Y2C2 406 aa23.96■■□□□ 1.43
LDB1-201ENST00000361198 IL18RAPO95256 599 aa23.95■■□□□ 1.43
LDB1-201ENST00000361198 STAG3L1P0CL83 205 aa23.95■■□□□ 1.43
LDB1-201ENST00000361198 FBXW10Q5XX13 1052 aa23.95■■□□□ 1.43
LDB1-201ENST00000361198 RHOT1Q8IXI2 618 aa23.95■■□□□ 1.43
LDB1-201ENST00000361198 WDTC1Q8N5D0 677 aa23.95■■□□□ 1.43
LDB1-201ENST00000361198 CPB2Q96IY4 423 aa23.95■■□□□ 1.43
LDB1-201ENST00000361198 LACTBL1A8MY62 500 aa23.95■■□□□ 1.42
LDB1-201ENST00000361198 PSTPIP1O43586 416 aa23.95■■□□□ 1.42
LDB1-201ENST00000361198 LSM8O95777 96 aaKnown RBP23.95■■□□□ 1.42
LDB1-201ENST00000361198 SNX1Q13596 522 aa23.95■■□□□ 1.42
LDB1-201ENST00000361198 QPCTQ16769 361 aa23.95■■□□□ 1.42
LDB1-201ENST00000361198 DENND2CQ68D51 928 aa23.95■■□□□ 1.42
LDB1-201ENST00000361198 C1orf127Q8N9H9 656 aa23.95■■□□□ 1.42
LDB1-201ENST00000361198 ATG4AQ8WYN0 398 aa23.95■■□□□ 1.42
LDB1-201ENST00000361198 MORF4L1Q9UBU8 362 aa23.95■■□□□ 1.42
LDB1-201ENST00000361198 UNCXA6NJT0 531 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 H3BRB1 525 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 ECEL1O95672 775 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 HNRNPH1P31943 449 aaKnown RBP23.94■■□□□ 1.42
LDB1-201ENST00000361198 RAP1GAPP47736 663 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 CDR1P51861 262 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 ZNF467Q7Z7K2 595 aaPredicted RBP23.94■■□□□ 1.42
LDB1-201ENST00000361198 IFNLR1Q8IU57 520 aaPredicted RBP23.94■■□□□ 1.42
LDB1-201ENST00000361198 TMEM35BQ8NCS4 154 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 TMEM109Q9BVC6 243 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 PDZD7Q9H5P4 517 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 TUT1Q9H6E5 874 aaKnown RBP23.94■■□□□ 1.42
LDB1-201ENST00000361198 PASKQ96RG2 1323 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 ZSWIM8A7E2V4 1837 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 GCLCP48506 637 aaPredicted RBP23.94■■□□□ 1.42
LDB1-201ENST00000361198 ACTN3Q08043 901 aaPredicted RBP23.94■■□□□ 1.42
LDB1-201ENST00000361198 ERMARDQ5T6L9 678 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 GPR142Q7Z601 462 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 DPP9Q86TI2 863 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 CCDC50Q8IVM0 306 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 HEMGNQ9BXL5 484 aa23.94■■□□□ 1.42
LDB1-201ENST00000361198 MTRF1LQ9UGC7 380 aaKnown RBP23.94■■□□□ 1.42
LDB1-201ENST00000361198 TCRBV5S1A1TA0A578 114 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 TMEM191CA6NGB0 347 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 CALB1P05937 261 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 RALAP11233 206 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 ARF4P18085 180 aaPredicted RBP23.93■■□□□ 1.42
LDB1-201ENST00000361198 GJC1P36383 396 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 SSR1P43307 286 aaKnown RBP23.93■■□□□ 1.42
LDB1-201ENST00000361198 WDR72Q3MJ13 1102 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 JADE1Q6IE81 842 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 MTHFD1LQ6UB35 978 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 CROCCP2Q86T23 111 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 SLCO2A1Q92959 643 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 FAM129AQ9BZQ8 928 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 PCDHGC3Q9UN70 934 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 MCF2P10911 925 aa23.93■■□□□ 1.42
LDB1-201ENST00000361198 MMP13P45452 471 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms