RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 SUN1O94901 812 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 ACSL3O95573 720 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
UBA3-202ENST00000361055 CHKAP35790 457 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 SNX1Q13596 522 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 ABHD15Q6UXT9 468 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
UBA3-202ENST00000361055 CHST7Q9NS84 486 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 LGALS13Q9UHV8 139 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 NEU2Q9Y3R4 380 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 TCP11X1B4DZS4 312 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 DKC1O60832 514 aaKnown RBP eCLIP13.15□□□□□ -0.3
UBA3-202ENST00000361055 ATP6V1G2O95670 118 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 GH1P01241 217 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 SUPT20HL2P0C7V6 817 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 ZNF865P0CJ78 1059 aaPredicted RBP13.15□□□□□ -0.3
UBA3-202ENST00000361055 ITGA8P53708 1063 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 DMP1Q13316 513 aaPredicted RBP13.15□□□□□ -0.3
UBA3-202ENST00000361055 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
UBA3-202ENST00000361055 CCNG2Q16589 344 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 KYNUQ16719 465 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 UGCGQ16739 394 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 DUSP28Q4G0W2 176 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 PRAMEF19Q5SWL8 479 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 MFSD14CQ5VZR4 134 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 DNAJC5GQ8N7S2 189 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 SEPT1Q8WYJ6 367 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 TRIB2Q92519 343 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
UBA3-202ENST00000361055 CCDC77Q9BR77 488 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 FOXP3Q9BZS1 431 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 KMT5AQ9NQR1 393 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 WBP1LQ9NX94 342 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 ACTL7BQ9Y614 415 aa13.15□□□□□ -0.3
UBA3-202ENST00000361055 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 DENND3A2RUS2 1198 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 O00370 1275 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 NOP56O00567 594 aaKnown RBP13.14□□□□□ -0.31
UBA3-202ENST00000361055 KRT5P13647 590 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 ATF2P15336 505 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 GARTP22102 1010 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 ADCY8P40145 1251 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 TMEM63BQ5T3F8 832 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 CEP128Q6ZU80 1094 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 COPS5Q92905 334 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 ATP6V0A1Q93050 837 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 EMID1Q96A84 441 aaPredicted RBP13.14□□□□□ -0.31
UBA3-202ENST00000361055 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 SCLT1Q96NL6 688 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 CXorf56Q9H5V9 222 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 NOD2Q9HC29 1040 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 ARL2BPQ9Y2Y0 163 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 IGKV6D-21A0A0A0MT36 114 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.14□□□□□ -0.31
UBA3-202ENST00000361055 GSTTP1A0A1W2PQM5 241 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 THAP12O43422 761 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 PROSCO94903 275 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 GJB6O95452 261 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
UBA3-202ENST00000361055 SMPD1P17405 629 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 PRMT2P55345 433 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 TNFAIP2Q03169 654 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 STAT4Q14765 748 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 HSDL1Q3SXM5 330 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 BRDTQ58F21 947 aaPredicted RBP13.14□□□□□ -0.31
UBA3-202ENST00000361055 SWSAP1Q6NVH7 229 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 C15orf39Q6ZRI6 1047 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 OTUD6AQ7L8S5 288 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 GPD1LQ8N335 351 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 CCDC89Q8N998 374 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 GIMAP7Q8NHV1 300 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 GPR20Q99678 358 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 KCNK9Q9NPC2 374 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 ABCF3Q9NUQ8 709 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 PRKAG3Q9UGI9 489 aa13.14□□□□□ -0.31
UBA3-202ENST00000361055 BRAFP15056 766 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 CREB1P16220 341 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 RRM1P23921 792 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 TCF7P36402 384 aaPredicted RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 CLDN10P78369 228 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 BNIP1Q12981 228 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 KLF1Q13351 362 aaPredicted RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 LRRC14Q15048 493 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 FAM133BQ5BKY9 247 aaKnown RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 ARHGEF18Q6ZSZ5 1173 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 CCDC60Q8IWA6 550 aaPredicted RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 GPATCH11Q8N954 259 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 CCHCR1Q8TD31 782 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 POMGNT1Q8WZA1 660 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms