RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 CFAP73A6NFT4 308 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 TRIM64A6NGJ6 449 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 TRIM64BA6NI03 449 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 FKTNO75072 461 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 SUN1O94901 812 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 GSTA2P09210 222 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 TFAMQ00059 246 aaKnown RBP10.44□□□□□ -0.74
SIN3A-201ENST00000360439 DGKZQ13574 1117 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 PPP4R4Q6NUP7 873 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 USP38Q8NB14 1042 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 MCPH1Q8NEM0 835 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 TMEM206Q9H813 350 aa10.44□□□□□ -0.74
SIN3A-201ENST00000360439 SIPA1L3O60292 1781 aaPredicted RBP10.44□□□□□ -0.74
SIN3A-201ENST00000360439 ADAMTS7Q9UKP4 1686 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 E9PMD0 336 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 TBX3O15119 743 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 STRNO43815 780 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 SCTRP47872 440 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 PTGISQ16647 500 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ARRDC4Q8NCT1 418 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 APPL2Q8NEU8 664 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 CAPSLQ8WWF8 208 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 MED10Q9BTT4 135 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 MMTAG2Q9BU76 263 aaKnown RBP10.43□□□□□ -0.74
SIN3A-201ENST00000360439 SMARCAD1Q9H4L7 1026 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 PCDH18Q9HCL0 1135 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 IL17RBQ9NRM6 502 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ATAD3AQ9NVI7 634 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 NOC2LQ9Y3T9 749 aaKnown RBP10.43□□□□□ -0.74
SIN3A-201ENST00000360439 MYMKA6NI61 221 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 HNRNPH3P31942 346 aaKnown RBP10.43□□□□□ -0.74
SIN3A-201ENST00000360439 CPT1AP50416 773 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 NPEPPSP55786 919 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 MCL1Q07820 350 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 DGKDQ16760 1214 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ARHGAP44Q17R89 818 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ANKRD20A2Q5SQ80 823 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ANKRD20A1Q5TYW2 823 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ANKRD20A3Q5VUR7 823 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 POTEGQ6S5H5 508 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 RNF19BQ6ZMZ0 732 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 SCG3Q8WXD2 468 aaKnown RBP10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ZIM3Q96PE6 472 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ACCSQ96QU6 501 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ASIC3Q9UHC3 531 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 NOVA2Q9UNW9 492 aaKnown RBP10.43□□□□□ -0.74
SIN3A-201ENST00000360439 CLIC2O15247 247 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 PHKA2P46019 1235 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ATP1A4Q13733 1029 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 SKIV2LQ15477 1246 aaKnown RBP10.43□□□□□ -0.74
SIN3A-201ENST00000360439 MAPK6Q16659 721 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 SPDYCQ5MJ68 293 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 TBATAQ96M53 351 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 CCDC28BQ9BUN5 200 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 MTIF3Q9H2K0 278 aaKnown RBP10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ECT2Q9H8V3 914 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 EGFRP00533 1210 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 LSP1P33241 339 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 MXI1P50539 228 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 ERFP50548 548 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 FLOT2Q14254 428 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 CD302Q8IX05 232 aa10.43□□□□□ -0.74
SIN3A-201ENST00000360439 A0A0A6YYK5 440 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 NVLO15381 856 aaKnown RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 SNX2O60749 519 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 USP2O75604 605 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 FAM107AO95990 144 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 CCNCP24863 283 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 CHRNA3P32297 505 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 TPD52P55327 224 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 LAMC2Q13753 1193 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 EARS2Q5JPH6 523 aaKnown RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 SDE2Q6IQ49 451 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 TMEM214Q6NUQ4 689 aaKnown RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 GDF3Q9NR23 364 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 GGA2Q9UJY4 613 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 TIAM2Q8IVF5 1701 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 CCDC85CA6NKD9 419 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 SYF2O95926 243 aaKnown RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 NR3C1P04150 777 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 PTGS2P35354 604 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 MFAP3P55082 362 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 ZNF280AP59817 542 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 CAV1Q03135 178 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 LMNB2Q03252 620 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 RFFLQ8WZ73 363 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 TRPM3Q9HCF6 1732 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 HMX1Q9NP08 348 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 SELENONQ9NZV5 590 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 PDP2Q9P2J9 529 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 GMEB1Q9Y692 573 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 ARHGAP10A1A4S6 786 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 ACSL4O60488 711 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 VDRP11473 427 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 ENDOUP21128 410 aaKnown RBP10.42□□□□□ -0.74
SIN3A-201ENST00000360439 PTGER2P43116 358 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 KLK7P49862 253 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 FUT2Q10981 343 aa10.42□□□□□ -0.74
SIN3A-201ENST00000360439 ZNF449Q6P9G9 518 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms