RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 GCKP35557 465 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 PAFAH1B1P43034 410 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 CFAP221Q4G0U5 840 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 PREPLQ4J6C6 727 aaPredicted RBP13.45□□□□□ -0.26
GGPS1-202ENST00000358966 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
GGPS1-202ENST00000358966 C7orf31Q8N865 590 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 C1orf131Q8NDD1 294 aaKnown RBP13.45□□□□□ -0.26
GGPS1-202ENST00000358966 CXorf38Q8TB03 319 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 TUBGCP4Q9UGJ1 667 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 AMFRQ9UKV5 643 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 NOC2LQ9Y3T9 749 aaKnown RBP13.45□□□□□ -0.26
GGPS1-202ENST00000358966 DAAM1Q9Y4D1 1078 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 FAM169AQ9Y6X4 670 aa13.45□□□□□ -0.26
GGPS1-202ENST00000358966 MEIS3P2A8K0S8 358 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 HAS3O00219 553 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 HCRTO43612 131 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 TRPA1O75762 1119 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 GZMAP12544 262 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 RPS6KA3P51812 740 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 CACNB2Q08289 660 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-202ENST00000358966 SNX17Q15036 470 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
GGPS1-202ENST00000358966 SGSM1Q2NKQ1 1148 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 SMC1BQ8NDV3 1235 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 HES6Q96HZ4 224 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 ACAP3Q96P50 834 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 GOLGA2P5Q9HBQ8 144 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 AGAP1Q9UPQ3 857 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 DDX3YO15523 660 aaKnown RBP13.44□□□□□ -0.26
GGPS1-202ENST00000358966 DARSP14868 501 aaKnown RBP13.44□□□□□ -0.26
GGPS1-202ENST00000358966 CD19P15391 556 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 EIF4BP23588 611 aaKnown RBP13.44□□□□□ -0.26
GGPS1-202ENST00000358966 FCGRTP55899 365 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 NOMO3P69849 1222 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 ENPEPQ07075 957 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 TMEM132DQ14C87 1099 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 TBC1D25Q3MII6 688 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 MCOLN2Q8IZK6 566 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 KIRREL3Q8IZU9 778 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 UBR7Q8N806 425 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 ADPGKQ9BRR6 497 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 GCOM2Q9BZD3 368 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-202ENST00000358966 DDX47Q9H0S4 455 aaKnown RBP13.44□□□□□ -0.26
GGPS1-202ENST00000358966 ANAPC7Q9UJX3 599 aa13.44□□□□□ -0.26
GGPS1-202ENST00000358966 RRN3P2A6NIE6 340 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 CHUKO15111 745 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 TBXAS1P24557 533 aaPredicted RBP13.43□□□□□ -0.26
GGPS1-202ENST00000358966 IGFBP6P24592 240 aaPredicted RBP13.43□□□□□ -0.26
GGPS1-202ENST00000358966 NSFP46459 744 aaKnown RBP13.43□□□□□ -0.26
GGPS1-202ENST00000358966 CYP4A22Q5TCH4 519 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 ZNF410Q86VK4 478 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 SESTD1Q86VW0 696 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 VTI1AQ96AJ9 217 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 MROH7Q68CQ1 1323 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 C17orf102A2RUQ5 167 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 PIK3R2O00459 728 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 RECQL4O94761 1208 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 FGGP02679 453 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 FAM163BP0C2L3 166 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 ZNF132P52740 706 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 POU5F1BQ06416 359 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 GDF6Q6KF10 455 aaPredicted RBP13.43□□□□□ -0.26
GGPS1-202ENST00000358966 USP38Q8NB14 1042 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 CAPNS2Q96L46 248 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 LPIN3Q9BQK8 851 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
GGPS1-202ENST00000358966 SMIM35A0A1B0GVV1 85 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 SNUPNO95149 360 aaKnown RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 MYCP01106 439 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 GLI1P08151 1106 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 CLNS1AP54105 237 aaKnown RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 RBBP5Q15291 538 aaKnown RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 ZNF667Q5HYK9 610 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 MON1BQ7L1V2 547 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 RHOT2Q8IXI1 618 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 ERVK-5Q9HDB9 667 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 GTF3C4Q9UKN8 822 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 RAB21Q9UL25 225 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 TCRBV7S2A1N4TA0A589 114 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 MYO1FO00160 1098 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 CYP1A1P04798 512 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 CYP1A2P05177 515 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 GJC1P36383 396 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 AFF1P51825 1210 aaKnown RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 RPL7AP62424 266 aaKnown RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 BEND6Q5SZJ8 279 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-202ENST00000358966 C8orf74Q6P047 294 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 SYCE1Q8N0S2 351 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 FAM204AQ9H8W3 233 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 DPP3Q9NY33 737 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 CAPN7Q9Y6W3 813 aa13.42□□□□□ -0.26
GGPS1-202ENST00000358966 CCDC151A5D8V7 595 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 SPOPO43791 374 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 DUSP11O75319 330 aaKnown RBP13.41□□□□□ -0.26
GGPS1-202ENST00000358966 IL18RAPO95256 599 aa13.41□□□□□ -0.26
GGPS1-202ENST00000358966 PEX19P40855 299 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms